STRINGSTRING
LOC103000259 LOC103000259 TWISTNB TWISTNB ERCC2 ERCC2 CD3EAP CD3EAP TAF1A TAF1A GTF2H1 GTF2H1 POLR1A POLR1A CDK7 CDK7 POLR2E POLR2E LOC103020319 LOC103020319 ZNRD1 ZNRD1 UBTF UBTF TAF1C TAF1C ERCC3 ERCC3 TBP TBP GTF2H5 GTF2H5 UBTFL1 UBTFL1 GTF2H3 GTF2H3 MNAT1 MNAT1 TBPL2 TBPL2 CCNH CCNH POLR1C POLR1C GTF2H4 GTF2H4 TTF1 TTF1 POLR2H POLR2H TAF1B TAF1B POLR1B POLR1B POLR1E POLR1E POLR2L POLR2L POLR2K POLR2K POLR2F POLR2F TAF1D TAF1D LOC103020561 LOC103020561
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103000259General transcription factor IIH subunit. (395 aa)
TWISTNBDNA-directed RNA polymerase I subunit RPA43. (332 aa)
ERCC2General transcription and DNA repair factor IIH helicase subunit XPD. (760 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (532 aa)
TAF1ATATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1. (450 aa)
GTF2H1General transcription factor IIH subunit 1 isoform X1. (548 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1717 aa)
CDK7Cyclin-dependent kinase 7 isoform X1; Belongs to the protein kinase superfamily. (346 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
LOC103020319Caveolae-associated protein 1. (390 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
UBTFNucleolar transcription factor 1. (720 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C. (784 aa)
ERCC3General transcription and DNA repair factor IIH helicase subunit XPB. (782 aa)
TBPTATA-box-binding protein isoform X1. (317 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
UBTFL1Upstream-binding factor 1-like protein 1. (411 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
TBPL2TATA box-binding protein-like protein 2. (449 aa)
CCNHcyclin-H isoform X1; Belongs to the cyclin family. (328 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1 isoform X1. (346 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
TTF1Transcription termination factor 1 isoform X1. (762 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
TAF1BTATA box-binding protein-associated factor RNA polymerase I subunit B. (592 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49. (419 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (58 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (115 aa)
TAF1DLOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit D. (321 aa)
LOC103020561LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like. (454 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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