STRINGSTRING
SMAD3 SMAD3 ZFHX4 ZFHX4 TGFB1 TGFB1 ZFHX3 ZFHX3 SMAD4 SMAD4 SMAD2 SMAD2 ZFHX2 ZFHX2 LOC103010956 LOC103010956 NINJ2 NINJ2 TP53 TP53
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAD3Mothers against decapentaplegic homolog. (425 aa)
ZFHX4LOW QUALITY PROTEIN: zinc finger homeobox protein 4. (3612 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
ZFHX3Zinc finger homeobox protein 3. (3687 aa)
SMAD4Mothers against decapentaplegic homolog. (553 aa)
SMAD2Mothers against decapentaplegic homolog. (467 aa)
ZFHX2LOW QUALITY PROTEIN: zinc finger homeobox protein 2. (2572 aa)
LOC103010956Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. (361 aa)
NINJ2Ninjurin-2. (106 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (387 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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