STRINGSTRING
KANK1 KANK1 EP300 EP300 POLR2F POLR2F EBAG9 EBAG9 ZNF217 ZNF217 NCOA3 NCOA3 LOC103008837 LOC103008837 LOC102998612 LOC102998612 LOC103009898 LOC103009898 LOC103020690 LOC103020690 YY1 YY1 LOC103019119 LOC103019119 ZFP42 ZFP42 ZC3H12C ZC3H12C POLR2K POLR2K LOC102997132 LOC102997132 CBFB CBFB CHD1 CHD1 POLR2L POLR2L GREB1L GREB1L LOC114235831 LOC114235831 ESR1 ESR1 TLE3 TLE3 LOC102997204 LOC102997204 JUND JUND GREB1 GREB1 POLR2H POLR2H CDK9 CDK9 HSP90AB1 HSP90AB1 TBPL2 TBPL2 PGR PGR NCOA1 NCOA1 MYB MYB TBPL1 TBPL1 GTF2A1L GTF2A1L TNRC6B TNRC6B TRPS1 TRPS1 GTF2A1 GTF2A1 ERBB4 ERBB4 LOC103002779 LOC103002779 LOC103016635 LOC103016635 GTF2F2 GTF2F2 POLR2J POLR2J LOC103002948 LOC103002948 LOC103002676 LOC103002676 ZC3H12B ZC3H12B TBP TBP LOC103005469 LOC103005469 CITED1 CITED1 NCOA2 NCOA2 PRMT1 PRMT1 LOC103018418 LOC103018418 FOS FOS LOC103018135 LOC103018135 RUNX1 RUNX1 KAT2B KAT2B POLR2D POLR2D ZC3H12A ZC3H12A LOC102997613 LOC102997613 CREBBP CREBBP PTGES3 PTGES3 SP1 SP1 CCNT1 CCNT1 LOC103003205 LOC103003205 LOC103015962 LOC103015962 LOC103010782 LOC103010782 LOC103004316 LOC103004316 LOC103010190 LOC103010190 LOC103004037 LOC103004037 LOC102998884 LOC102998884 HSP90AA1 HSP90AA1 FOXA1 FOXA1 LOC103017256 LOC103017256 LOC103018846 LOC103018846 LOC103018297 LOC103018297 LOC103019385 LOC103019385 LOC103019838 LOC103019838 LOC103016974 LOC103016974 MED1 MED1 LOC103020116 LOC103020116 LOC103020394 LOC103020394 LOC103014184 LOC103014184 LOC103019568 LOC103019568 LOC103015570 LOC103015570 LOC103018292 LOC103018292 LOC103015848 LOC103015848 POLR2E POLR2E DDX5 DDX5 KDM1A KDM1A POLR2G POLR2G CUNH11orf88 CUNH11orf88 LOC103019280 LOC103019280 TFF3 TFF3 POU2F1 POU2F1 CXXC5 CXXC5 USF1 USF1 KAT5 KAT5 HDAC1 HDAC1 PRMT8 PRMT8 FKBP4 FKBP4 LOC103000493 LOC103000493 KDM4B KDM4B CARM1 CARM1 KANK3 KANK3 GTF2F1 GTF2F1 KANK2 KANK2 FOSB FOSB POLR2C POLR2C NR5A2 NR5A2 GATA3 GATA3 POLR2A POLR2A GTF2A2 GTF2A2 LOC103019413 LOC103019413 USF2 USF2 POLR2B POLR2B POLR2I POLR2I KANK4 KANK4 NRIP1 NRIP1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KANK1KN motif and ankyrin repeat domain-containing protein 1 isoform X1. (1355 aa)
EP300Histone acetyltransferase p300. (2445 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (115 aa)
EBAG9Receptor-binding cancer antigen expressed on SiSo cells; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases. (212 aa)
ZNF217Zinc finger protein 217. (907 aa)
NCOA3Nuclear receptor coactivator. (1397 aa)
LOC103008837Histone H3.1-like isoform X1. (165 aa)
LOC102998612Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103009898Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103020690Histone H2B; Belongs to the histone H2B family. (126 aa)
YY1Transcriptional repressor protein YY1. (345 aa)
LOC103019119Histone H2B; Belongs to the histone H2B family. (126 aa)
ZFP42Zinc finger protein 42 homolog. (300 aa)
ZC3H12CProbable ribonuclease ZC3H12C. (851 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC102997132LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (620 aa)
CBFBCore-binding factor subunit beta. (151 aa)
CHD1LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1. (1709 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (58 aa)
GREB1LGREB1-like protein. (1824 aa)
LOC114235831Estrogen receptor-like. (144 aa)
ESR1LOW QUALITY PROTEIN: estrogen receptor. (422 aa)
TLE3Transducin-like enhancer protein 3 isoform X1. (782 aa)
LOC102997204Histone H2A; Belongs to the histone H2A family. (129 aa)
JUNDTranscription factor jun-D. (262 aa)
GREB1Protein GREB1. (2096 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
HSP90AB1Heat shock protein HSP 90-beta. (724 aa)
TBPL2TATA box-binding protein-like protein 2. (449 aa)
PGRProgesterone receptor. (883 aa)
NCOA1Nuclear receptor coactivator. (1441 aa)
MYBTranscriptional activator Myb. (855 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
GTF2A1LTFIIA-alpha and beta-like factor. (477 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X5. (1867 aa)
TRPS1Zinc finger transcription factor Trps1. (1293 aa)
GTF2A1Transcription initiation factor IIA subunit 1. (336 aa)
ERBB4Receptor protein-tyrosine kinase. (1298 aa)
LOC103002779Histone H2A; Belongs to the histone H2A family. (168 aa)
LOC103016635LOW QUALITY PROTEIN: uroplakin-3b-like protein 1. (254 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
LOC103002948Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103002676Histone H2B type 1-A-like; Belongs to the histone H2B family. (126 aa)
ZC3H12BProbable ribonuclease ZC3H12B. (836 aa)
TBPTATA-box-binding protein isoform X1. (317 aa)
LOC103005469Late histone H2B.L4-like; Belongs to the histone H2B family. (140 aa)
CITED1LOW QUALITY PROTEIN: cbp/p300-interacting transactivator 1. (200 aa)
NCOA2Nuclear receptor coactivator. (1459 aa)
PRMT1Protein arginine N-methyltransferase 1 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (371 aa)
LOC103018418Histone H2A; Belongs to the histone H2A family. (109 aa)
FOSProto-oncogene c-Fos. (380 aa)
LOC103018135Putative heat shock protein HSP 90-beta-3. (106 aa)
RUNX1Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. (457 aa)
KAT2BHistone acetyltransferase KAT2B. (703 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (104 aa)
ZC3H12AEndoribonuclease ZC3H12A. (583 aa)
LOC102997613Histone-arginine methyltransferase CARM1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (553 aa)
CREBBPCREB-binding protein isoform X1. (2444 aa)
PTGES3Prostaglandin E synthase 3. (160 aa)
SP1Transcription factor Sp1. (787 aa)
CCNT1cyclin-T1 isoform X1; Belongs to the cyclin family. (727 aa)
LOC103003205Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103015962DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LOC103010782Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103004316Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103010190Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103004037LOW QUALITY PROTEIN: putative histone H2B type 2-D; Belongs to the histone H2B family. (130 aa)
LOC102998884Histone H2B; Belongs to the histone H2B family. (126 aa)
HSP90AA1Heat shock protein HSP 90-alpha. (733 aa)
FOXA1Hepatocyte nuclear factor 3-alpha. (433 aa)
LOC103017256Histone H2B; Belongs to the histone H2B family. (143 aa)
LOC103018846Histone H2A; Belongs to the histone H2A family. (147 aa)
LOC103018297Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103019385Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103019838Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103016974Histone H2B; Belongs to the histone H2B family. (126 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1578 aa)
LOC103020116Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103020394Histone H3.1-like. (136 aa)
LOC103014184Histone H3; Belongs to the histone H3 family. (150 aa)
LOC103019568Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103015570Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103018292Histone H2B type 1-L-like; Belongs to the histone H2B family. (154 aa)
LOC103015848Histone H2A; Belongs to the histone H2A family. (130 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (756 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
CUNH11orf88UPF0722 protein C11orf88 homolog isoform X1. (168 aa)
LOC103019280Histone H2A; Belongs to the histone H2A family. (128 aa)
TFF3Trefoil factor 3. (94 aa)
POU2F1POU domain protein. (744 aa)
CXXC5CXXC-type zinc finger protein 5. (320 aa)
USF1Upstream stimulatory factor 1 isoform X1. (310 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (482 aa)
PRMT8Protein arginine N-methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (425 aa)
FKBP4Peptidylprolyl isomerase. (440 aa)
LOC103000493Histone H2B; Belongs to the histone H2B family. (126 aa)
KDM4BLysine-specific demethylase 4B isoform X1. (1121 aa)
CARM1Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (634 aa)
KANK3KN motif and ankyrin repeat domain-containing protein 3. (368 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (518 aa)
KANK2KN motif and ankyrin repeat domain-containing protein 2 isoform X1. (858 aa)
FOSBProtein fosB isoform X1. (341 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3 isoform X1. (275 aa)
NR5A2Nuclear receptor subfamily 5 group A member 2. (495 aa)
GATA3Trans-acting T-cell-specific transcription factor GATA-3 isoform X1. (444 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1963 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
LOC103019413Histone H2B; Belongs to the histone H2B family. (122 aa)
USF2Upstream stimulatory factor 2. (330 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
KANK4KN motif and ankyrin repeat domain-containing protein 4. (1009 aa)
NRIP1Nuclear receptor-interacting protein 1. (1156 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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