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gatA1 gatA1 gatC gatC gatA2 gatA2 gatB gatB Arad_4843 Arad_4843 Arad_7352 Arad_7352 Arad_7518 Arad_7518 Arad_8302 Arad_8302 dhaL-3 dhaL-3 gatA1-2 gatA1-2 Arad_8681 Arad_8681 Arad_8842 Arad_8842 gatA1-3 gatA1-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gatA1glutamyl-tRNA amidotransferase subunit A protein. (463 aa)
gatCglutamyl-tRNA amidotransferase subunit C protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (95 aa)
gatA2glutamyl-tRNA amidotransferase subunit A protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (490 aa)
gatBglutamyl-tRNA amidotransferase subunit B protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (474 aa)
Arad_4843Conserved hypothetical protein. (458 aa)
Arad_7352Amidase protein; Belongs to the amidase family. (474 aa)
Arad_7518Amidase family protein; Belongs to the amidase family. (456 aa)
Arad_8302Amidase protein; Belongs to the amidase family. (504 aa)
dhaL-3Aldehyde dehydrogenase protein. (500 aa)
gatA1-2glutamyl-tRNA amidotransferase subunit A protein. (476 aa)
Arad_8681Acetamidase/formamidase protein. (303 aa)
Arad_8842Amidase protein. (498 aa)
gatA1-3glutamyl-tRNA amidotransferase subunit A protein. (475 aa)
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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