STRINGSTRING
pipb2 pipb2 Arad_0170 Arad_0170 Arad_0320 Arad_0320 Arad_0437 Arad_0437 Arad_0495 Arad_0495 ACM28587.1 ACM28587.1 Arad_1580 Arad_1580 pip pip Arad_2203 Arad_2203 pip-2 pip-2 Arad_2644 Arad_2644 Arad_2697 Arad_2697 Arad_3762 Arad_3762 Arad_3774 Arad_3774 Arad_4515 Arad_4515 Arad_7009 Arad_7009 rutD rutD Arad_7247 Arad_7247 Arad_7274 Arad_7274 pipb1 pipb1 Arad_8698 Arad_8698 Arad_9008 Arad_9008 Arad_9635 Arad_9635 Arad_9727 Arad_9727 Arad_9840 Arad_9840
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pipb2Proline iminopeptidase protein; Belongs to the peptidase S33 family. (296 aa)
Arad_0170Hydrolase protein. (283 aa)
Arad_0320Peroxidase protein. (268 aa)
Arad_0437Hydrolase protein. (270 aa)
Arad_0495Hydrolase protein. (284 aa)
ACM28587.1Epoxide hydrolase protein. (346 aa)
Arad_1580Hydrolase protein. (297 aa)
pipProline iminopeptidase; Belongs to the peptidase S33 family. (327 aa)
Arad_2203Hydrolase protein. (260 aa)
pip-2Proline iminopeptidase; Belongs to the peptidase S33 family. (320 aa)
Arad_2644Epoxide hydrolase protein. (293 aa)
Arad_2697Hydrolase protein. (324 aa)
Arad_3762Hydrolase protein. (259 aa)
Arad_3774Lactone-specific esterase protein. (355 aa)
Arad_4515Hydrolase protein. (241 aa)
Arad_7009Epoxide hydrolase protein. (301 aa)
rutDHydrolase protein; May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Belongs to the AB hydrolase superfamily. Hydrolase RutD family. (262 aa)
Arad_7247Alpha/beta hydrolase protein. (283 aa)
Arad_72743-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase protein. (286 aa)
pipb1Proline iminopeptidase protein; Belongs to the peptidase S33 family. (323 aa)
Arad_8698Chloride peroxidase protein. (325 aa)
Arad_9008Exported protein. (361 aa)
Arad_9635Esterase protein. (277 aa)
Arad_9727Hydrolase protein. (281 aa)
Arad_9840Hydrolase protein. (247 aa)
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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