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soxAe-2 soxAe-2 soxAch soxAch trmE trmE soxGe soxGe Arad_7067 Arad_7067 Arad_7728 Arad_7728 Arad_1609 Arad_1609 Arad_8372 Arad_8372 gcvT-2 gcvT-2 gcvT gcvT Arad_3491 Arad_3491 soxAe soxAe Arad_3548 Arad_3548 soxGch soxGch
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
soxAe-2Sarcosine oxidase alpha subunit protein. (977 aa)
soxAchSarcosine oxidase alpha subunit protein. (997 aa)
trmEtRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (444 aa)
soxGeSarcosine oxidase gamma subunit protein. (184 aa)
Arad_7067Glycine cleavage system T protein; Belongs to the GcvT family. (813 aa)
Arad_7728Sarcosine dehydrogenase protein; Belongs to the GcvT family. (853 aa)
Arad_1609Aminomethyltransferase protein (glycine cleavage); Belongs to the GcvT family. (279 aa)
Arad_8372Aminomethyltransferase protein; Belongs to the GcvT family. (377 aa)
gcvT-2Glycine cleavage system T protein; Belongs to the GcvT family. (789 aa)
gcvTGlycine cleavage system T protein. (356 aa)
Arad_3491Glycine cleavage system T protein; Belongs to the GcvT family. (808 aa)
soxAeSarcosine oxidase alpha subunit protein. (985 aa)
Arad_3548Glycine cleavage system T protein; Belongs to the GcvT family. (815 aa)
soxGchSarcosine oxidase gamma subunit protein. (182 aa)
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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