STRINGSTRING
soxBe-2 soxBe-2 Arad_9164 Arad_9164 ooxA-2 ooxA-2 Arad_0729 Arad_0729 ordL ordL ACM28559.1 ACM28559.1 Arad_3007 Arad_3007 Arad_3332 Arad_3332 Arad_3491 Arad_3491 soxBe soxBe Arad_3548 Arad_3548 soxBch soxBch glpD glpD ordL-2 ordL-2 Arad_7067 Arad_7067 ooxB ooxB Arad_7416 Arad_7416 glpD-2 glpD-2 Arad_7470 Arad_7470 Arad_7728 Arad_7728 Arad_9174 Arad_9174 Arad_8145 Arad_8145
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
soxBe-2Sarcosine oxidase beta subunit protein. (416 aa)
Arad_9164D-amino acid oxidase protein. (442 aa)
ooxA-2D-Octopine oxidase. (972 aa)
Arad_0729D-amino acid dehydrogenase protein. (368 aa)
ordLOxidoreductase protein. (432 aa)
ACM28559.1Oxidoreductase protein. (430 aa)
Arad_3007Sarcosine oxidase protein. (397 aa)
Arad_3332D-amino acid oxidase protein. (394 aa)
Arad_3491Glycine cleavage system T protein; Belongs to the GcvT family. (808 aa)
soxBeSarcosine oxidase beta subunit protein. (417 aa)
Arad_3548Glycine cleavage system T protein; Belongs to the GcvT family. (815 aa)
soxBchSarcosine oxidase beta subunit protein. (417 aa)
glpDGlycerol-3-phosphate dehydrogenase protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (521 aa)
ordL-2Oxidoreductase protein. (435 aa)
Arad_7067Glycine cleavage system T protein; Belongs to the GcvT family. (813 aa)
ooxBD-Octopine oxidase. (378 aa)
Arad_7416D-amino acid dehydrogenase protein. (424 aa)
glpD-2Glycerol-3-phosphate dehydrogenase protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (503 aa)
Arad_7470Glycerol-3-phosphate dehydrogenase protein. (579 aa)
Arad_7728Sarcosine dehydrogenase protein; Belongs to the GcvT family. (853 aa)
Arad_9174FAD-dependent oxidoreductase protein. (425 aa)
Arad_8145Oxidoreductase protein. (448 aa)
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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