STRINGSTRING
CTQ63727.1 CTQ63727.1 rbsC_1 rbsC_1 mglA_1 mglA_1 yphF yphF ydjH_1 ydjH_1 CTQ63744.1 CTQ63744.1 yvaA_1 yvaA_1 lsrF lsrF CTQ65052.1 CTQ65052.1 kduD_1 kduD_1 yjmD yjmD mdlA_1 mdlA_1 rbsC_2 rbsC_2 ytfT ytfT rbsA_1 rbsA_1 ytfQ ytfQ aldA_1 aldA_1 lldR_1 lldR_1 alkJ_2 alkJ_2 gfo_1 gfo_1 iolE_1 iolE_1 rbsB_1 rbsB_1 rbsC_3 rbsC_3 rbsA_2 rbsA_2 cytR_1 cytR_1 alkJ_3 alkJ_3 betB_1 betB_1 CTQ67472.1 CTQ67472.1 CTQ67473.1 CTQ67473.1 rbsC_4 rbsC_4 rbsA_3 rbsA_3 rbsC_5 rbsC_5 alsB_1 alsB_1 nicS nicS alsB_2 alsB_2 rbsC_7 rbsC_7 mglA_2 mglA_2 CTQ68188.1 CTQ68188.1 CTQ68193.1 CTQ68193.1 CTQ68196.1 CTQ68196.1 CTQ68347.1 CTQ68347.1 alsB_3 alsB_3 rbsC_8 rbsC_8 rbsA_5 rbsA_5 CTQ68359.1 CTQ68359.1 CTQ68366.1 CTQ68366.1 pld1_2 pld1_2 fucU fucU CTQ68381.1 CTQ68381.1 cytR_2 cytR_2 CTQ68578.1 CTQ68578.1 lsrD_1 lsrD_1 mglA_3 mglA_3 ygbM_2 ygbM_2 fucA_3 fucA_3 CTQ73547.1 CTQ73547.1 Hgd_2 Hgd_2 gnl_2 gnl_2 rbsC_9 rbsC_9 rbsC_10 rbsC_10 xylG_1 xylG_1 xylF_1 xylF_1 mlc_1 mlc_1 rbsB_3 rbsB_3 rbsC_11 rbsC_11 rbsA_7 rbsA_7 gnl_3 gnl_3 CTQ75581.1 CTQ75581.1 sugB_8 sugB_8 ugpA_1 ugpA_1 CTQ75591.1 CTQ75591.1 ugpC_9 ugpC_9 gntR_2 gntR_2 luxP luxP rbsC_13 rbsC_13 xylG_2 xylG_2 CTQ75612.1 CTQ75612.1 lsrD_3 lsrD_3 rbsA_9 rbsA_9 CTQ78062.1 CTQ78062.1 alsC_3 alsC_3 alsC_4 alsC_4 rbsA_10 rbsA_10 CTQ78071.1 CTQ78071.1 mdlA_3 mdlA_3 rhaM_1 rhaM_1 deoR_2 deoR_2 rbsC_17 rbsC_17 rbsB_7 rbsB_7 rbsA_12 rbsA_12 chvE chvE xylG_4 xylG_4 xylH_1 xylH_1 CTQ79891.1 CTQ79891.1 araA_1 araA_1 csgA_3 csgA_3 lsrD_5 lsrD_5 rbsC_19 rbsC_19 araG araG rbsB_8 rbsB_8 gnl_4 gnl_4 devS devS liaR_3 liaR_3 rhaM_3 rhaM_3 ulaE ulaE fabG_18 fabG_18 rbsC_20 rbsC_20 rbsA_15 rbsA_15 rbsB_9 rbsB_9 gntR_5 gntR_5 CTQ80955.1 CTQ80955.1 afr_7 afr_7 rbsC_21 rbsC_21 rbsA_16 rbsA_16 CTQ80959.1 CTQ80959.1 rbsB_10 rbsB_10 CTQ80961.1 CTQ80961.1 rlp2 rlp2 CTQ80963.1 CTQ80963.1 rhmD_2 rhmD_2 gabD_8 gabD_8 livQ_3 livQ_3 CTQ81007.1 CTQ81007.1 xylH_3 xylH_3 rbsA_18 rbsA_18 xylF_3 xylF_3 aldH_2 aldH_2 CTQ81014.1 CTQ81014.1 CTQ81015.1 CTQ81015.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CTQ63727.1Hypothetical protein. (333 aa)
rbsC_1Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (321 aa)
mglA_1Galactose/methyl galactoside import ATP-binding protein MglA. (500 aa)
yphFABC transporter periplasmic-binding protein YphF precursor. (320 aa)
ydjH_1Putative sugar kinase YdjH. (325 aa)
CTQ63744.1ABC-type sugar transport system, auxiliary component. (216 aa)
yvaA_1Putative oxidoreductase YvaA. (381 aa)
lsrFPutative aldolase LsrF. (274 aa)
CTQ65052.1Hypothetical protein. (92 aa)
kduD_12-dehydro-3-deoxy-D-gluconate 5-dehydrogenase. (256 aa)
yjmDPutative zinc-type alcohol dehydrogenase-like protein YjmD. (344 aa)
mdlA_1Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (365 aa)
rbsC_2Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (333 aa)
ytfTInner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
rbsA_1Ribose import ATP-binding protein RbsA. (506 aa)
ytfQABC transporter periplasmic-binding protein YtfQ precursor. (323 aa)
aldA_1Lactaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (489 aa)
lldR_1Putative L-lactate dehydrogenase operon regulatory protein. (237 aa)
alkJ_2Alcohol dehydrogenase [acceptor]. (540 aa)
gfo_1Glucose--fructose oxidoreductase precursor. (386 aa)
iolE_1Inosose dehydratase. (353 aa)
rbsB_1D-ribose-binding periplasmic protein precursor. (318 aa)
rbsC_3Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (342 aa)
rbsA_2Ribose import ATP-binding protein RbsA. (507 aa)
cytR_1HTH-type transcriptional repressor CytR. (344 aa)
alkJ_3Alcohol dehydrogenase [acceptor]. (533 aa)
betB_1Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (529 aa)
CTQ67472.1Putative protein containing double-stranded beta helix domain protein. (187 aa)
CTQ67473.1D-arabitol-phosphate dehydrogenase. (341 aa)
rbsC_4Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (314 aa)
rbsA_3Ribose import ATP-binding protein RbsA. (501 aa)
rbsC_5Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (347 aa)
alsB_1D-allose-binding periplasmic protein precursor. (369 aa)
nicSNicotinate degradation protein S. (210 aa)
alsB_2D-allose-binding periplasmic protein precursor. (315 aa)
rbsC_7Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
mglA_2Galactose/methyl galactoside import ATP-binding protein MglA. (247 aa)
CTQ68188.1D-tagatose 3-epimerase. (284 aa)
CTQ68193.1Nucleoside triphosphate hydrolase domain-containing protein. (210 aa)
CTQ68196.1Hypothetical protein. (257 aa)
CTQ68347.1Ureidoglycolate lyase. (284 aa)
alsB_3D-allose-binding periplasmic protein precursor. (314 aa)
rbsC_8Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (335 aa)
rbsA_5Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (508 aa)
CTQ68359.12-keto-3-deoxy-L-fuconate dehydrogenase. (245 aa)
CTQ68366.1L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (424 aa)
pld1_2Pyridoxal 4-dehydrogenase. (350 aa)
fucUL-fucose mutarotase; Belongs to the RbsD / FucU family. (142 aa)
CTQ68381.1Putative metal-dependent hydrolase of the TIM-barrel fold protein. (276 aa)
cytR_2HTH-type transcriptional repressor CytR. (334 aa)
CTQ68578.1D-allose transporter subunit. (313 aa)
lsrD_1Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family. (375 aa)
mglA_3Galactose/methyl galactoside import ATP-binding protein MglA. (259 aa)
ygbM_2Putative hydroxypyruvate isomerase YgbM; Belongs to the hyi family. (252 aa)
fucA_3L-fuculose phosphate aldolase. (215 aa)
CTQ73547.1Hypothetical protein. (410 aa)
Hgd_22-(hydroxymethyl)glutarate dehydrogenase. (300 aa)
gnl_2Gluconolactonase precursor. (317 aa)
rbsC_9Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (314 aa)
rbsC_10Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (321 aa)
xylG_1Xylose import ATP-binding protein XylG. (505 aa)
xylF_1D-xylose-binding periplasmic protein precursor. (359 aa)
mlc_1Making large colonies protein. (442 aa)
rbsB_3D-ribose-binding periplasmic protein precursor. (338 aa)
rbsC_11Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (360 aa)
rbsA_7Ribose import ATP-binding protein RbsA. (257 aa)
gnl_3Gluconolactonase precursor. (307 aa)
CTQ75581.1Hypothetical protein. (247 aa)
sugB_8Trehalose transport system permease protein SugB. (290 aa)
ugpA_1Sn-glycerol-3-phosphate transport system permease protein UgpA. (307 aa)
CTQ75591.1Putative ABC transporter-binding protein precursor. (443 aa)
ugpC_9Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (363 aa)
gntR_2Gluconate utilization system GNT-I transcriptional repressor. (331 aa)
luxPAutoinducer 2-binding periplasmic protein LuxP precursor. (378 aa)
rbsC_13Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (375 aa)
xylG_2Xylose import ATP-binding protein XylG. (257 aa)
CTQ75612.1ABC-type sugar transport system, periplasmic component. (349 aa)
lsrD_3Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family. (340 aa)
rbsA_9Ribose import ATP-binding protein RbsA. (502 aa)
CTQ78062.1D-ribose transporter subunit RbsB. (342 aa)
alsC_3D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. (346 aa)
alsC_4D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
rbsA_10Ribose import ATP-binding protein RbsA. (508 aa)
CTQ78071.1Putative metal-dependent hydrolase of the TIM-barrel fold protein. (287 aa)
mdlA_3Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (370 aa)
rhaM_1L-rhamnose mutarotase. (109 aa)
deoR_2Deoxyribonucleoside regulator. (319 aa)
rbsC_17Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
rbsB_7D-ribose-binding periplasmic protein precursor. (313 aa)
rbsA_12Ribose import ATP-binding protein RbsA. (497 aa)
chvEMultiple sugar-binding periplasmic receptor ChvE precursor. (354 aa)
xylG_4Xylose import ATP-binding protein XylG. (504 aa)
xylH_1Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (417 aa)
CTQ79891.1Fumarylacetoacetate (FAA) hydrolase family protein. (331 aa)
araA_1L-arabinose 1-dehydrogenase. (307 aa)
csgA_3C signal. (157 aa)
lsrD_5Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family. (316 aa)
rbsC_19Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (315 aa)
araGArabinose import ATP-binding protein AraG. (493 aa)
rbsB_8D-ribose-binding periplasmic protein precursor. (340 aa)
gnl_4Gluconolactonase precursor. (305 aa)
devSRedox sensor histidine kinase response regulator DevS. (432 aa)
liaR_3Transcriptional regulatory protein LiaR. (242 aa)
rhaM_3L-rhamnose mutarotase. (105 aa)
ulaEL-ribulose-5-phosphate 3-epimerase UlaE. (270 aa)
fabG_183-oxoacyl-[acyl-carrier-protein] reductase FabG. (248 aa)
rbsC_20Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
rbsA_15Ribose import ATP-binding protein RbsA. (274 aa)
rbsB_9D-ribose-binding periplasmic protein precursor. (371 aa)
gntR_5Gluconate utilization system GNT-I transcriptional repressor. (349 aa)
CTQ80955.1Hypothetical protein. (609 aa)
afr_71,5-anhydro-D-fructose reductase. (341 aa)
rbsC_21Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (354 aa)
rbsA_16Ribose import ATP-binding protein RbsA. (520 aa)
CTQ80959.1Putative periplasmic lipoprotein. (222 aa)
rbsB_10D-ribose-binding periplasmic protein precursor. (312 aa)
CTQ80961.1Hypothetical protein. (274 aa)
rlp2Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family. (422 aa)
CTQ80963.1Hypothetical protein. (439 aa)
rhmD_2L-rhamnonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (389 aa)
gabD_8Succinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family. (486 aa)
livQ_36'''-hydroxyparomomycin C oxidase. (539 aa)
CTQ81007.1Hypothetical protein. (149 aa)
xylH_3Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (407 aa)
rbsA_18Ribose import ATP-binding protein RbsA. (272 aa)
xylF_3D-xylose-binding periplasmic protein precursor. (353 aa)
aldH_2NADP-dependent fatty aldehyde dehydrogenase. (497 aa)
CTQ81014.1Fumarylacetoacetate (FAA) hydrolase family protein. (384 aa)
CTQ81015.1Alpha/beta hydrolase fold protein. (278 aa)
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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