STRINGSTRING
amiC_3 amiC_3 ascG ascG yphF yphF ytfQ ytfQ amiC_1 amiC_1 CTQ65413.1 CTQ65413.1 rbsB_1 rbsB_1 cytR_1 cytR_1 braC_1 braC_1 livK livK CTQ80848.1 CTQ80848.1 braC_7 braC_7 rbsB_10 rbsB_10 rbsR_2 rbsR_2 CTQ80966.1 CTQ80966.1 CTQ80998.1 CTQ80998.1 CTQ80999.1 CTQ80999.1 xylF_3 xylF_3 braC_8 braC_8 CTQ66316.1 CTQ66316.1 braC_3 braC_3 gntR_1 gntR_1 xylF_1 xylF_1 CTQ72566.1 CTQ72566.1 torT torT ccpA_3 ccpA_3 malI malI rafR_2 rafR_2 degA_2 degA_2 cytR_5 cytR_5 CTQ69811.1 CTQ69811.1 alsB_1 alsB_1 exuR exuR rbsB_2 rbsB_2 ccpA_2 ccpA_2 rbsB_4 rbsB_4 braC_4 braC_4 gntR_2 gntR_2 luxP luxP rbsB_3 rbsB_3 degA_1 degA_1 CTQ75612.1 CTQ75612.1 gntR_3 gntR_3 rafR_1 rafR_1 braC_2 braC_2 cytR_4 cytR_4 CTQ68859.1 CTQ68859.1 cytR_3 cytR_3 CTQ68578.1 CTQ68578.1 cytR_2 cytR_2 alsB_3 alsB_3 alsB_2 alsB_2 gntR_4 gntR_4 amiC_2 amiC_2 CTQ76468.1 CTQ76468.1 degA_3 degA_3 CTQ77766.1 CTQ77766.1 CTQ78062.1 CTQ78062.1 braC_5 braC_5 rbsB_5 rbsB_5 livJ livJ ccpA_4 ccpA_4 CTQ79367.1 CTQ79367.1 rbsB_6 rbsB_6 CTQ79487.1 CTQ79487.1 rbsB_7 rbsB_7 ccpA_5 ccpA_5 braC_6 braC_6 tmpC_1 tmpC_1 tmpC_2 tmpC_2 chvE chvE purR purR lsrB lsrB xylF_2 xylF_2 cytR_6 cytR_6 rbsB_8 rbsB_8 rbsR_1 rbsR_1 rbsB_9 rbsB_9 gntR_5 gntR_5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amiC_3Aliphatic amidase expression-regulating protein. (436 aa)
ascGCryptic asc operon repressor. (325 aa)
yphFABC transporter periplasmic-binding protein YphF precursor. (320 aa)
ytfQABC transporter periplasmic-binding protein YtfQ precursor. (323 aa)
amiC_1Aliphatic amidase expression-regulating protein. (428 aa)
CTQ65413.1Leucine ABC transporter subunit substrate-binding protein LivK. (417 aa)
rbsB_1D-ribose-binding periplasmic protein precursor. (318 aa)
cytR_1HTH-type transcriptional repressor CytR. (344 aa)
braC_1Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (388 aa)
livKLeucine-specific-binding protein precursor. (468 aa)
CTQ80848.1ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system. (390 aa)
braC_7Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (399 aa)
rbsB_10D-ribose-binding periplasmic protein precursor. (312 aa)
rbsR_2Ribose operon repressor. (335 aa)
CTQ80966.1D-ribose transporter subunit RbsB. (306 aa)
CTQ80998.1Lac repressor. (344 aa)
CTQ80999.1DNA-binding transcriptional regulator GalS. (342 aa)
xylF_3D-xylose-binding periplasmic protein precursor. (353 aa)
braC_8Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (418 aa)
CTQ66316.1Trehalose repressor. (340 aa)
braC_3Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (367 aa)
gntR_1Gluconate utilization system GNT-I transcriptional repressor. (341 aa)
xylF_1D-xylose-binding periplasmic protein precursor. (359 aa)
CTQ72566.1Putative lipoprotein. (407 aa)
torTPeriplasmic protein TorT precursor. (357 aa)
ccpA_3Glucose-resistance amylase regulator. (341 aa)
malIMaltose regulon regulatory protein MalI. (338 aa)
rafR_2Raffinose operon repressor. (349 aa)
degA_2Degradation activator. (363 aa)
cytR_5HTH-type transcriptional repressor CytR. (347 aa)
CTQ69811.1Hypothetical protein. (443 aa)
alsB_1D-allose-binding periplasmic protein precursor. (369 aa)
exuRPutative galacturonate locus repressor. (337 aa)
rbsB_2D-ribose-binding periplasmic protein precursor. (320 aa)
ccpA_2Glucose-resistance amylase regulator. (362 aa)
rbsB_4D-ribose-binding periplasmic protein precursor. (313 aa)
braC_4Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (384 aa)
gntR_2Gluconate utilization system GNT-I transcriptional repressor. (331 aa)
luxPAutoinducer 2-binding periplasmic protein LuxP precursor. (378 aa)
rbsB_3D-ribose-binding periplasmic protein precursor. (338 aa)
degA_1Degradation activator. (335 aa)
CTQ75612.1ABC-type sugar transport system, periplasmic component. (349 aa)
gntR_3Gluconate utilization system GNT-I transcriptional repressor. (341 aa)
rafR_1Raffinose operon repressor. (364 aa)
braC_2Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (399 aa)
cytR_4HTH-type transcriptional repressor CytR. (368 aa)
CTQ68859.1D-allose transporter subunit. (364 aa)
cytR_3HTH-type transcriptional repressor CytR. (343 aa)
CTQ68578.1D-allose transporter subunit. (313 aa)
cytR_2HTH-type transcriptional repressor CytR. (334 aa)
alsB_3D-allose-binding periplasmic protein precursor. (314 aa)
alsB_2D-allose-binding periplasmic protein precursor. (315 aa)
gntR_4Gluconate utilization system GNT-I transcriptional repressor. (338 aa)
amiC_2Aliphatic amidase expression-regulating protein. (384 aa)
CTQ76468.1Leucine ABC transporter subunit substrate-binding protein LivK. (428 aa)
degA_3Degradation activator. (348 aa)
CTQ77766.1Leucine ABC transporter subunit substrate-binding protein LivK. (448 aa)
CTQ78062.1D-ribose transporter subunit RbsB. (342 aa)
braC_5Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (392 aa)
rbsB_5D-ribose-binding periplasmic protein precursor. (346 aa)
livJLeu/Ile/Val-binding protein precursor. (394 aa)
ccpA_4Glucose-resistance amylase regulator. (338 aa)
CTQ79367.1Trehalose repressor. (340 aa)
rbsB_6D-ribose-binding periplasmic protein precursor. (327 aa)
CTQ79487.1D-allose transporter subunit. (356 aa)
rbsB_7D-ribose-binding periplasmic protein precursor. (313 aa)
ccpA_5Glucose-resistance amylase regulator. (345 aa)
braC_6Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (401 aa)
tmpC_1Purine nucleoside receptor A. (331 aa)
tmpC_2Purine nucleoside receptor A. (339 aa)
chvEMultiple sugar-binding periplasmic receptor ChvE precursor. (354 aa)
purRPurine nucleotide synthesis repressor. (337 aa)
lsrBAutoinducer 2-binding protein LsrB precursor. (330 aa)
xylF_2D-xylose-binding periplasmic protein precursor. (373 aa)
cytR_6HTH-type transcriptional repressor CytR. (342 aa)
rbsB_8D-ribose-binding periplasmic protein precursor. (340 aa)
rbsR_1Ribose operon repressor. (343 aa)
rbsB_9D-ribose-binding periplasmic protein precursor. (371 aa)
gntR_5Gluconate utilization system GNT-I transcriptional repressor. (349 aa)
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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