(14 nodes) snRNA processing network (Tetrahymena thermophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q23AP8_TETTS	Uncharacterized protein. (1085 aa)
	Q22XJ7_TETTS	Exosome complex exonuclease RRP40, putative. (249 aa)
	I7LV82_TETTS	Metallo beta lactamase domain protein. (645 aa)
	I7LVP6_TETTS	Uncharacterized protein. (317 aa)
	I7LXK7_TETTS	Uncharacterized protein. (1119 aa)
	I7LZP1_TETTS	3' exoribonuclease family 1 protein. (240 aa)
	Q22RD5_TETTS	Uncharacterized protein. (288 aa)
	Q226C1_TETTS	Metallo-beta-lactamase domain protein. (175 aa)
	I7M2A2_TETTS	Exosome complex exonuclease RRP4, putative. (309 aa)
	I7LZU1_TETTS	3' exoribonuclease family 1 protein. (228 aa)
	Q24GF7_TETTS	3' exoribonuclease family 1 protein. (270 aa)
	Q24BS8_TETTS	Uncharacterized protein. (1170 aa)
	Q23PW9_TETTS	3' exoribonuclease family 1 protein. (329 aa)
	Q23NE4_TETTS	Lactamase_B domain-containing protein. (747 aa)

Your Current Organism:

Tetrahymena thermophila

NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I7LV82_TETTS	I7LXK7_TETTS	I7LV82	I7LXK7	Metallo beta lactamase domain protein.	Uncharacterized protein.	0.988
I7LV82_TETTS	Q23AP8_TETTS	I7LV82	Q23AP8	Metallo beta lactamase domain protein.	Uncharacterized protein.	0.985
I7LV82_TETTS	Q23NE4_TETTS	I7LV82	Q23NE4	Metallo beta lactamase domain protein.	Lactamase_B domain-containing protein.	0.988
I7LV82_TETTS	Q24BS8_TETTS	I7LV82	Q24BS8	Metallo beta lactamase domain protein.	Uncharacterized protein.	0.910
I7LXK7_TETTS	I7LV82_TETTS	I7LXK7	I7LV82	Uncharacterized protein.	Metallo beta lactamase domain protein.	0.988
I7LXK7_TETTS	Q226C1_TETTS	I7LXK7	Q226C1	Uncharacterized protein.	Metallo-beta-lactamase domain protein.	0.988
I7LXK7_TETTS	Q23AP8_TETTS	I7LXK7	Q23AP8	Uncharacterized protein.	Uncharacterized protein.	0.999
I7LXK7_TETTS	Q23NE4_TETTS	I7LXK7	Q23NE4	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.999
I7LXK7_TETTS	Q24BS8_TETTS	I7LXK7	Q24BS8	Uncharacterized protein.	Uncharacterized protein.	0.995
I7LZP1_TETTS	I7M2A2_TETTS	I7LZP1	I7M2A2	3' exoribonuclease family 1 protein.	Exosome complex exonuclease RRP4, putative.	0.991
I7LZP1_TETTS	Q22RD5_TETTS	I7LZP1	Q22RD5	3' exoribonuclease family 1 protein.	Uncharacterized protein.	0.990
I7LZP1_TETTS	Q22XJ7_TETTS	I7LZP1	Q22XJ7	3' exoribonuclease family 1 protein.	Exosome complex exonuclease RRP40, putative.	0.992
I7LZP1_TETTS	Q23PW9_TETTS	I7LZP1	Q23PW9	3' exoribonuclease family 1 protein.	3' exoribonuclease family 1 protein.	0.990
I7LZP1_TETTS	Q24GF7_TETTS	I7LZP1	Q24GF7	3' exoribonuclease family 1 protein.	3' exoribonuclease family 1 protein.	0.992
I7LZU1_TETTS	I7M2A2_TETTS	I7LZU1	I7M2A2	3' exoribonuclease family 1 protein.	Exosome complex exonuclease RRP4, putative.	0.991
I7LZU1_TETTS	Q22RD5_TETTS	I7LZU1	Q22RD5	3' exoribonuclease family 1 protein.	Uncharacterized protein.	0.990
I7LZU1_TETTS	Q22XJ7_TETTS	I7LZU1	Q22XJ7	3' exoribonuclease family 1 protein.	Exosome complex exonuclease RRP40, putative.	0.992
I7LZU1_TETTS	Q23PW9_TETTS	I7LZU1	Q23PW9	3' exoribonuclease family 1 protein.	3' exoribonuclease family 1 protein.	0.990
I7LZU1_TETTS	Q24GF7_TETTS	I7LZU1	Q24GF7	3' exoribonuclease family 1 protein.	3' exoribonuclease family 1 protein.	0.992
I7M2A2_TETTS	I7LZP1_TETTS	I7M2A2	I7LZP1	Exosome complex exonuclease RRP4, putative.	3' exoribonuclease family 1 protein.	0.991