STRINGSTRING
sypA sypA sypB sypB sypC sypC sypD sypD sypE sypE sypH sypH sypI sypI sypJ sypJ sypK sypK sypL sypL sypM sypM sypN sypN sypO sypO sypP sypP sypQ sypQ sypR sypR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sypAPutative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. (105 aa)
sypBOuter membrane protein; Syp polysaccharide locus. (274 aa)
sypCPeriplasmic protein involved in polysaccharide export; Syp polysaccharide locus. (703 aa)
sypDATPase involved in chromosome partitioning; Syp polysaccharide locus. (235 aa)
sypETwo-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. (505 aa)
sypHGlycosyl transferases group 1; Syp polysaccharide locus. (338 aa)
sypIGlycosyl transferases group 1; Syp polysaccharide locus. (424 aa)
sypJGlycosyl transferases group 1; Syp polysaccharide locus. (387 aa)
sypKOligosaccharide translocase; Syp polysaccharide locus. (480 aa)
sypLSyp polysaccharide locus. (461 aa)
sypMAcetyltransferase (isoleucine patch superfamily); Syp polysaccharide locus. (251 aa)
sypNGlycosyltransferase; Syp polysaccharide locus. (378 aa)
sypOChain length regulator (capsular polysaccharide biosynthesis); Syp polysaccharide locus. (499 aa)
sypPGlycosyltransferase; Syp polysaccharide locus. (362 aa)
sypQGlycosyltransferase; Syp polysaccharide locus. (395 aa)
sypRSugar transferase; Syp polysaccharide locus. (214 aa)
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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