STRINGSTRING
luxO luxO ntrC ntrC ntrB ntrB ompR ompR envZ envZ gmr gmr phoQ2 phoQ2 phoQ1 phoQ1 phoP phoP luxQ luxQ toxR toxR VF_0895 VF_0895 VF_0923 VF_0923 luxU luxU VF_0985 VF_0985 VF_0998 VF_0998 ainR ainR VF_1054 VF_1054 VF_1086 VF_1086 VF_1116 VF_1116 yehT yehT yehU yehU VF_1296 VF_1296 VF_1297 VF_1297 VF_1396 VF_1396 VF_1397 VF_1397 VF_1400 VF_1400 VF_1401 VF_1401 torR torR torS torS gacA gacA sprE sprE norR1 norR1 cheB cheB cheA cheA cheY cheY flrC flrC cheV1 cheV1 narQ narQ narP narP phoR phoR phoB phoB cadC cadC gacS gacS arcA arcA arcB arcB chiS chiS cpxR cpxR cpxA cpxA VF_2374 VF_2374 VF_2379 VF_2379 uhpB uhpB uhpA uhpA VF_A0072 VF_A0072 VF_A0102 VF_A0102 VF_A0103 VF_A0103 cusS cusS cusR cusR VF_A0181 VF_A0181 VF_A0182 VF_A0182 VF_A0211 VF_A0211 VF_A0212 VF_A0212 VF_A0217 VF_A0217 VF_A0231 VF_A0231 VF_A0233 VF_A0233 rscS rscS VF_A0240 VF_A0240 VF_A0247 VF_A0247 VF_A0259 VF_A0259 VF_A0265 VF_A0265 VF_A0266 VF_A0266 VF_A0304 VF_A0304 pspF pspF BinK BinK VF_A0435 VF_A0435 VF_A0436 VF_A0436 VF_A0465 VF_A0465 tcpP tcpP VF_A0477 VF_A0477 VF_A0560 VF_A0560 VF_A0561 VF_A0561 VF_A0608 VF_A0608 VF_A0665 VF_A0665 cheV3 cheV3 VF_A0732 VF_A0732 VF_A0733 VF_A0733 VF_A0795 VF_A0795 cheV2 cheV2 VF_A0860 VF_A0860 ydeH ydeH VF_A1016 VF_A1016 VF_A1017 VF_A1017 sypE sypE sypF sypF sypG sypG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
luxOAutoinducer repressor protein LuxO. (476 aa)
ntrCDNA-binding transcriptional regulator NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (467 aa)
ntrBNitrogen regulatory sensory histidine kinase in two-component regulatory system with NtrC. (352 aa)
ompROmpR DNA-binding osmolarity response regulator in two-component regulatory system with EnvZ. (239 aa)
envZEnvZ osmolarity sensory histidine kinase in two-component regulatory system with OmpR. (434 aa)
gmrModulator of Rnase II stability. (675 aa)
phoQ2Sensory histidine kinase in two-compoent regulatory system with PhoP. (320 aa)
phoQ1Sensory histidine kinase in two-compoent regulatory system with PhoP. (447 aa)
phoPDNA-binding response regulator in two-component regulatory system with PhoQ. (226 aa)
luxQMembrane-bound sensor histidine kinase LuxQ. (744 aa)
toxRTranscriptional activator ToxR. (293 aa)
VF_0895Hypothetical protein. (307 aa)
VF_0923Response regulator receiver domain protein. (439 aa)
luxUAutoinducer phosphorelay protein LuxU. (118 aa)
VF_0985GGDEF domain protein. (827 aa)
VF_0998Transcriptional regulator. (522 aa)
ainRPutative autoinducer regulatory protein AinR. (819 aa)
VF_1054ScrF protein. (157 aa)
VF_1086Transcriptional regulatory protein. (285 aa)
VF_1116Transcriptional regulatory protein. (426 aa)
yehTPredicted response regulator in two-component system with YehU. (238 aa)
yehUPredicted sensory kinase in two-component system with YehT. (560 aa)
VF_1296Hybrid sensory histidine kinase. (692 aa)
VF_1297Hypothetical protein. (394 aa)
VF_1396DNA-binding response regulator. (218 aa)
VF_1397Sensor histidine kinase. (454 aa)
VF_1400Sensor histidine kinase. (680 aa)
VF_1401Sigma-54 dependent response regulator. (475 aa)
torRDNA-binding response regulator in two-component regulatory system with TorS. (232 aa)
torSHybrid sensory histidine kinase in two-component regulatory system with TorR. (972 aa)
gacADNA-binding response regulator in two-component regulatory system with GacS. (214 aa)
sprEProteolytic adapter for RpoS degradation by ClpXP (RssB, ExpM). (368 aa)
norR1Anaerobic nitric oxide reductase regulator; Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon. Activation also requires sigma-54. (512 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (376 aa)
cheAChemotactic sensory histidine kinase CheA, in two-component regulatory system with CheB and CheY. (735 aa)
cheYChemotaxis regulator CheY, transmits signal to flagellar motor component. (122 aa)
flrCTwo-component response regulator FlrC. (477 aa)
cheV1CheW/CheY hybrid protein CheV1. (306 aa)
narQSensory histidine kinase in two-component regulatory system with NarP (NarL). (563 aa)
narPDNA-binding response regulator in two-component regulatory system with NarQ. (203 aa)
phoRSensory histidine kinase in two-component regulatory system with PhoB. (431 aa)
phoBDNA-binding response regulator in two-component regulatory system with PhoR. (230 aa)
cadCDNA-binding transcriptional activator CadC. (541 aa)
gacSHybrid sensory histidine kinase, in two-component regulatory system with GacA. (931 aa)
arcADNA-binding response regulator in two-component regulatory system with ArcB or CpxA. (239 aa)
arcBHybrid sensory histidine kinase in two-component regulatory system with ArcA. (788 aa)
chiSChitin sensor histidine kinase ChiS. (1126 aa)
cpxRDNA-binding response regulator in two-component regulatory system with CpxA. (227 aa)
cpxASensory histidine kinase in two-component regulatory system with CpxR. (462 aa)
VF_2374Two-component response regulator. (209 aa)
VF_2379Sensory transduction protein kinase. (1146 aa)
uhpBSensory histidine kinase in two-component regulatory sytem with UhpA. (485 aa)
uhpADNA-binding response regulator in two-component regulatory system wtih UhpB. (202 aa)
VF_A0072Hybrid two component sensor histidine kinase. (575 aa)
VF_A0102Two component sensor histidine kinase. (565 aa)
VF_A0103Two component response regulator. (205 aa)
cusSSensory histidine kinase in two-component regulatory system with CusR, senses copper ions; Member of a two-component regulatory system. (446 aa)
cusRDNA-binding response regulator in two-component regulatory system with CusS. (226 aa)
VF_A0181Probable transcriptional regulator SyrB. (221 aa)
VF_A0182Two component sensor histidine kinase. (462 aa)
VF_A0211Transcriptional regulator. (228 aa)
VF_A0212Two component sensor histidine kinase. (474 aa)
VF_A0217Hypothetical protein. (106 aa)
VF_A0231Hypothetical protein. (211 aa)
VF_A0233Hypothetical protein. (736 aa)
rscSHybrid sensor kinase RscS; Activator of syp locus genes. (927 aa)
VF_A0240SUA5 protein. (373 aa)
VF_A0247SUA5 protein. (387 aa)
VF_A0259Hypothetical transcriptional regulatory protein. (366 aa)
VF_A0265Two component sensor histidine kinase. (418 aa)
VF_A0266Transcriptional regulator. (221 aa)
VF_A0304Hypothetical protein. (375 aa)
pspFDNA-binding transcriptional activator. (339 aa)
BinKSensor histidine kinase, GacS/BarA family. (864 aa)
VF_A0435Two component sensor histidine kinase. (449 aa)
VF_A0436Putative transcriptional regulatory protein. (225 aa)
VF_A0465Hypothetical protein. (449 aa)
tcpPTranscriptional regulatory protein TcpP. (203 aa)
VF_A0477Hypothetical protein. (450 aa)
VF_A0560Two component sensor histidine kinase. (481 aa)
VF_A0561Two component response regulator; Similar to BasR. (218 aa)
VF_A0608Two component response regulator. (334 aa)
VF_A0665Hypothetical cytosolic protein. (274 aa)
cheV3CheW/CheY hybrid protein CheV3. (298 aa)
VF_A0732Transcriptional regulator. (267 aa)
VF_A0733Two component sensor histidine kinase. (350 aa)
VF_A0795Two component response regulator. (331 aa)
cheV2CheW/CheY hybrid protein CheV2. (313 aa)
VF_A0860Hypothetical protein. (160 aa)
ydeHTwo component response regulator, GGDEF domain protein. (299 aa)
VF_A1016Two component sensory histidine kinase. (864 aa)
VF_A1017Two component response regulator. (572 aa)
sypETwo-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. (505 aa)
sypFTwo-component hybrid sensor histidine kinase; Syp polysaccharide locus. (766 aa)
sypGSigma-54 dependent transcriptional regulator; Syp polysaccharide locus. (500 aa)
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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