STRINGSTRING
ubiB ubiB VF_0091 VF_0091 VF_0094 VF_0094 ntrB ntrB envZ envZ wzc wzc VF_0349 VF_0349 gmr gmr phoQ2 phoQ2 phoQ1 phoQ1 luxQ luxQ ychA ychA luxU luxU VF_0985 VF_0985 mifA mifA VF_0990 VF_0990 ainR ainR yehU yehU VF_1296 VF_1296 VF_1397 VF_1397 VF_1400 VF_1400 VF_1477 VF_1477 torS torS prkA prkA cheA cheA narQ narQ phoR phoR VF_2039 VF_2039 gacS gacS arcB arcB chiS chiS VF_2261 VF_2261 cpxA cpxA VF_2379 VF_2379 VF_2496 VF_2496 rdoA rdoA uhpB uhpB VF_A0072 VF_A0072 VF_A0102 VF_A0102 cusS cusS VF_A0182 VF_A0182 VF_A0212 VF_A0212 VF_A0217 VF_A0217 VF_A0233 VF_A0233 rscS rscS VF_A0265 VF_A0265 BinK BinK VF_A0435 VF_A0435 VF_A0465 VF_A0465 VF_A0477 VF_A0477 VF_A0560 VF_A0560 VF_A0733 VF_A0733 VF_A1016 VF_A1016 sypF sypF sypO sypO VF_A1077 VF_A1077
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubiB2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. (544 aa)
VF_0091GGDEF domain protein. (821 aa)
VF_0094GGDEF domain protein. (852 aa)
ntrBNitrogen regulatory sensory histidine kinase in two-component regulatory system with NtrC. (352 aa)
envZEnvZ osmolarity sensory histidine kinase in two-component regulatory system with OmpR. (434 aa)
wzcProtein-tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis. (720 aa)
VF_0349Chain length regulator, exopolysaccharide biosynthesis protein. (726 aa)
gmrModulator of Rnase II stability. (675 aa)
phoQ2Sensory histidine kinase in two-compoent regulatory system with PhoP. (320 aa)
phoQ1Sensory histidine kinase in two-compoent regulatory system with PhoP. (447 aa)
luxQMembrane-bound sensor histidine kinase LuxQ. (744 aa)
ychAPredicted transcriptional regulator. (270 aa)
luxUAutoinducer phosphorelay protein LuxU. (118 aa)
VF_0985GGDEF domain protein. (827 aa)
mifADiguanylate cyclase (GGDEF), inhibitor of flagellar motility. (631 aa)
VF_0990Serine/threonine protein kinase. (319 aa)
ainRPutative autoinducer regulatory protein AinR. (819 aa)
yehUPredicted sensory kinase in two-component system with YehT. (560 aa)
VF_1296Hybrid sensory histidine kinase. (692 aa)
VF_1397Sensor histidine kinase. (454 aa)
VF_1400Sensor histidine kinase. (680 aa)
VF_1477Tetratricopeptide repeat family protein. (328 aa)
torSHybrid sensory histidine kinase in two-component regulatory system with TorR. (972 aa)
prkASerine kinase PrkA. (644 aa)
cheAChemotactic sensory histidine kinase CheA, in two-component regulatory system with CheB and CheY. (735 aa)
narQSensory histidine kinase in two-component regulatory system with NarP (NarL). (563 aa)
phoRSensory histidine kinase in two-component regulatory system with PhoB. (431 aa)
VF_2039Hypothetical protein. (393 aa)
gacSHybrid sensory histidine kinase, in two-component regulatory system with GacA. (931 aa)
arcBHybrid sensory histidine kinase in two-component regulatory system with ArcA. (788 aa)
chiSChitin sensor histidine kinase ChiS. (1126 aa)
VF_2261GGDEF domain protein. (631 aa)
cpxASensory histidine kinase in two-component regulatory system with CpxR. (462 aa)
VF_2379Sensory transduction protein kinase. (1146 aa)
VF_2496Serine/threonine protein kinase. (441 aa)
rdoAThr/Ser kinase implicated in Cpx signal transduction; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. (329 aa)
uhpBSensory histidine kinase in two-component regulatory sytem with UhpA. (485 aa)
VF_A0072Hybrid two component sensor histidine kinase. (575 aa)
VF_A0102Two component sensor histidine kinase. (565 aa)
cusSSensory histidine kinase in two-component regulatory system with CusR, senses copper ions; Member of a two-component regulatory system. (446 aa)
VF_A0182Two component sensor histidine kinase. (462 aa)
VF_A0212Two component sensor histidine kinase. (474 aa)
VF_A0217Hypothetical protein. (106 aa)
VF_A0233Hypothetical protein. (736 aa)
rscSHybrid sensor kinase RscS; Activator of syp locus genes. (927 aa)
VF_A0265Two component sensor histidine kinase. (418 aa)
BinKSensor histidine kinase, GacS/BarA family. (864 aa)
VF_A0435Two component sensor histidine kinase. (449 aa)
VF_A0465Hypothetical protein. (449 aa)
VF_A0477Hypothetical protein. (450 aa)
VF_A0560Two component sensor histidine kinase. (481 aa)
VF_A0733Two component sensor histidine kinase. (350 aa)
VF_A1016Two component sensory histidine kinase. (864 aa)
sypFTwo-component hybrid sensor histidine kinase; Syp polysaccharide locus. (766 aa)
sypOChain length regulator (capsular polysaccharide biosynthesis); Syp polysaccharide locus. (499 aa)
VF_A1077RIO1 protein. (285 aa)
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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