Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VF_2012 | rpoH | VF_2012 | VF_2450 | Major capsid protein. | RNA polymerase, sigma-32 (sigma-H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.442 |
| VF_2012 | rsd | VF_2012 | VF_2404 | Major capsid protein. | Stationary phase protein, anti sigma-70 factor Rsd; Belongs to the Rsd/AlgQ family. | 0.491 |
| rpoD | rpoH | VF_2254 | VF_2450 | RNA polymerase, sigma-70 (sigma-D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | RNA polymerase, sigma-32 (sigma-H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.587 |
| rpoD | rpoN | VF_2254 | VF_0387 | RNA polymerase, sigma-70 (sigma-D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.662 |
| rpoD | rsd | VF_2254 | VF_2404 | RNA polymerase, sigma-70 (sigma-D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Stationary phase protein, anti sigma-70 factor Rsd; Belongs to the Rsd/AlgQ family. | 0.962 |
| rpoH | VF_2012 | VF_2450 | VF_2012 | RNA polymerase, sigma-32 (sigma-H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | Major capsid protein. | 0.442 |
| rpoH | rpoD | VF_2450 | VF_2254 | RNA polymerase, sigma-32 (sigma-H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | RNA polymerase, sigma-70 (sigma-D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.587 |
| rpoH | rsd | VF_2450 | VF_2404 | RNA polymerase, sigma-32 (sigma-H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | Stationary phase protein, anti sigma-70 factor Rsd; Belongs to the Rsd/AlgQ family. | 0.713 |
| rpoN | rpoD | VF_0387 | VF_2254 | RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase, sigma-70 (sigma-D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.662 |
| rpoN | sypA | VF_0387 | VF_A1020 | RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | 0.479 |
| rsd | VF_2012 | VF_2404 | VF_2012 | Stationary phase protein, anti sigma-70 factor Rsd; Belongs to the Rsd/AlgQ family. | Major capsid protein. | 0.491 |
| rsd | rpoD | VF_2404 | VF_2254 | Stationary phase protein, anti sigma-70 factor Rsd; Belongs to the Rsd/AlgQ family. | RNA polymerase, sigma-70 (sigma-D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.962 |
| rsd | rpoH | VF_2404 | VF_2450 | Stationary phase protein, anti sigma-70 factor Rsd; Belongs to the Rsd/AlgQ family. | RNA polymerase, sigma-32 (sigma-H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.713 |
| sypA | rpoN | VF_A1020 | VF_0387 | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.479 |
| sypA | sypE | VF_A1020 | VF_A1024 | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | Two-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. | 0.999 |
| sypE | sypA | VF_A1024 | VF_A1020 | Two-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | 0.999 |