Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| flgM | fliA | VF_1881 | VF_1834 | Flagellar anti-sigma-28 factor FlgM. | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.998 |
| fliA | flgM | VF_1834 | VF_1881 | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | Flagellar anti-sigma-28 factor FlgM. | 0.998 |
| fliA | sypA | VF_1834 | VF_A1020 | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | 0.583 |
| fliA | sypE | VF_1834 | VF_A1024 | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | Two-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. | 0.870 |
| sypA | fliA | VF_A1020 | VF_1834 | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.583 |
| sypA | sypE | VF_A1020 | VF_A1024 | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | Two-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. | 0.999 |
| sypE | fliA | VF_A1024 | VF_1834 | Two-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.870 |
| sypE | sypA | VF_A1024 | VF_A1020 | Two-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. | Putative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. | 0.999 |