STRINGSTRING
hlyU hlyU oxyR oxyR sypA sypA yfcE yfcE sypG sypG pilB pilB toxR toxR ahpC ahpC rseP rseP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hlyUTranscriptional activator HlyU. (98 aa)
oxyROxidative stress-responsive DNA-binding transcriptional regulator OxyR; Belongs to the LysR transcriptional regulatory family. (299 aa)
sypAPutative sulphate transporter, anti-sigma factor antagonist; Syp polysaccharide locus. (105 aa)
yfcEPredicted phosphatase. (183 aa)
sypGSigma-54 dependent transcriptional regulator; Syp polysaccharide locus. (500 aa)
pilBPilus assembly protein PilB. (562 aa)
toxRTranscriptional activator ToxR. (293 aa)
ahpCAlkyl hydroperoxide reductase, C22 subunit. (202 aa)
rsePMembrane-associated zinc protease (RseP, YaeL). (452 aa)
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.