STRINGSTRING
VF_0923 VF_0923 luxQ luxQ phoP phoP ompR ompR uhpA uhpA VF_A0072 VF_A0072 VF_A0103 VF_A0103 cusR cusR VF_A0181 VF_A0181 VF_A0211 VF_A0211 VF_A0216 VF_A0216 VF_A0233 VF_A0233 rscS rscS VF_A0266 VF_A0266 BinK BinK VF_A0436 VF_A0436 VF_A0561 VF_A0561 VF_A0608 VF_A0608 cheV3 cheV3 VF_A0732 VF_A0732 VF_A0795 VF_A0795 cheV2 cheV2 ydeH ydeH arcB arcB VF_A1017 VF_A1017 sypE sypE sypF sypF sypG sypG VF_2379 VF_2379 ntrC ntrC VF_2374 VF_2374 cpxR cpxR chiS chiS VF_A1016 VF_A1016 arcA arcA gacS gacS phoB phoB narP narP cheV1 cheV1 flrC flrC cheY cheY cheB cheB sprE sprE gacA gacA torS torS torR torR VF_1401 VF_1401 VF_1396 VF_1396 VF_1296 VF_1296 yehT yehT VF_1054 VF_1054 ainR ainR luxO luxO
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VF_0923Response regulator receiver domain protein. (439 aa)
luxQMembrane-bound sensor histidine kinase LuxQ. (744 aa)
phoPDNA-binding response regulator in two-component regulatory system with PhoQ. (226 aa)
ompROmpR DNA-binding osmolarity response regulator in two-component regulatory system with EnvZ. (239 aa)
uhpADNA-binding response regulator in two-component regulatory system wtih UhpB. (202 aa)
VF_A0072Hybrid two component sensor histidine kinase. (575 aa)
VF_A0103Two component response regulator. (205 aa)
cusRDNA-binding response regulator in two-component regulatory system with CusS. (226 aa)
VF_A0181Probable transcriptional regulator SyrB. (221 aa)
VF_A0211Transcriptional regulator. (228 aa)
VF_A0216Two component response regulator. (382 aa)
VF_A0233Hypothetical protein. (736 aa)
rscSHybrid sensor kinase RscS; Activator of syp locus genes. (927 aa)
VF_A0266Transcriptional regulator. (221 aa)
BinKSensor histidine kinase, GacS/BarA family. (864 aa)
VF_A0436Putative transcriptional regulatory protein. (225 aa)
VF_A0561Two component response regulator; Similar to BasR. (218 aa)
VF_A0608Two component response regulator. (334 aa)
cheV3CheW/CheY hybrid protein CheV3. (298 aa)
VF_A0732Transcriptional regulator. (267 aa)
VF_A0795Two component response regulator. (331 aa)
cheV2CheW/CheY hybrid protein CheV2. (313 aa)
ydeHTwo component response regulator, GGDEF domain protein. (299 aa)
arcBHybrid sensory histidine kinase in two-component regulatory system with ArcA. (788 aa)
VF_A1017Two component response regulator. (572 aa)
sypETwo-component response regulator, sigma factor PP2C-like phosphatase; Syp polysaccharide locus. (505 aa)
sypFTwo-component hybrid sensor histidine kinase; Syp polysaccharide locus. (766 aa)
sypGSigma-54 dependent transcriptional regulator; Syp polysaccharide locus. (500 aa)
VF_2379Sensory transduction protein kinase. (1146 aa)
ntrCDNA-binding transcriptional regulator NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (467 aa)
VF_2374Two-component response regulator. (209 aa)
cpxRDNA-binding response regulator in two-component regulatory system with CpxA. (227 aa)
chiSChitin sensor histidine kinase ChiS. (1126 aa)
VF_A1016Two component sensory histidine kinase. (864 aa)
arcADNA-binding response regulator in two-component regulatory system with ArcB or CpxA. (239 aa)
gacSHybrid sensory histidine kinase, in two-component regulatory system with GacA. (931 aa)
phoBDNA-binding response regulator in two-component regulatory system with PhoR. (230 aa)
narPDNA-binding response regulator in two-component regulatory system with NarQ. (203 aa)
cheV1CheW/CheY hybrid protein CheV1. (306 aa)
flrCTwo-component response regulator FlrC. (477 aa)
cheYChemotaxis regulator CheY, transmits signal to flagellar motor component. (122 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (376 aa)
sprEProteolytic adapter for RpoS degradation by ClpXP (RssB, ExpM). (368 aa)
gacADNA-binding response regulator in two-component regulatory system with GacS. (214 aa)
torSHybrid sensory histidine kinase in two-component regulatory system with TorR. (972 aa)
torRDNA-binding response regulator in two-component regulatory system with TorS. (232 aa)
VF_1401Sigma-54 dependent response regulator. (475 aa)
VF_1396DNA-binding response regulator. (218 aa)
VF_1296Hybrid sensory histidine kinase. (692 aa)
yehTPredicted response regulator in two-component system with YehU. (238 aa)
VF_1054ScrF protein. (157 aa)
ainRPutative autoinducer regulatory protein AinR. (819 aa)
luxOAutoinducer repressor protein LuxO. (476 aa)
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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