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| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (469 aa) |
| | ntrC | DNA-binding transcriptional regulator NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (467 aa) |
| | ntrB | Nitrogen regulatory sensory histidine kinase in two-component regulatory system with NtrC. (352 aa) |
| | glnA | Glutamine synthetase. (469 aa) |
| | ompR | OmpR DNA-binding osmolarity response regulator in two-component regulatory system with EnvZ. (239 aa) |
| | envZ | EnvZ osmolarity sensory histidine kinase in two-component regulatory system with OmpR. (434 aa) |
| | gfcE | Predicted exopolysaccharide export protein. (383 aa) |
| | etp | Phosphotyrosine-protein phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (146 aa) |
| | wzc | Protein-tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis. (720 aa) |
| | rpoN | RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (489 aa) |
| | yneH | Predicted glutaminase; Belongs to the glutaminase family. (306 aa) |
| | phoQ2 | Sensory histidine kinase in two-compoent regulatory system with PhoP. (320 aa) |
| | phoQ1 | Sensory histidine kinase in two-compoent regulatory system with PhoP. (447 aa) |
| | phoP | DNA-binding response regulator in two-component regulatory system with PhoQ. (226 aa) |
| | csrA | Pleiotropic regulatory protein for carbon source metabolism; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small [...] (65 aa) |
| | luxP | Periplasmic AI-2 binding protein LuxP. (372 aa) |
| | luxQ | Membrane-bound sensor histidine kinase LuxQ. (744 aa) |
| | motA1 | Flagellar motor protein MotA1. (254 aa) |
| | VfcA | Methyl-accepting chemotaxis protein. (624 aa) |
| | luxO | Autoinducer repressor protein LuxO. (476 aa) |
| | luxU | Autoinducer phosphorelay protein LuxU. (118 aa) |
| | cydA | Cytochrome d terminal oxidase, subunit I. (529 aa) |
| | cydB | Cytochrome d terminal oxidase, subunit II. (378 aa) |
| | ybgT | Cyd operon protein YbgT. (35 aa) |
| | VF_0987 | Methyl-accepting chemotaxis protein. (650 aa) |
| | ainR | Putative autoinducer regulatory protein AinR. (819 aa) |
| | VF_1054 | ScrF protein. (157 aa) |
| | VF_1088 | Anaerobic C4-dicarboxylate transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. (437 aa) |
| | VF_1091 | Methyl-accepting chemotaxis protein. (524 aa) |
| | VF_1133 | Methyl-accepting chemotaxis protein. (669 aa) |
| | ccoN | Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (476 aa) |
| | ccoO | Cytochrome c oxidase, cbb3-type, subunit II. (203 aa) |
| | ccoQ | Cbb3-type cytochrome oxidase component FixQ family. (61 aa) |
| | ccoP | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (323 aa) |
| | VF_1369 | Methyl-accepting chemotaxis protein. (677 aa) |
| | VF_1503 | Methyl-accepting chemotaxis protein. (467 aa) |
| | maeA | Malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme); Belongs to the malic enzymes family. (562 aa) |
| | torR | DNA-binding response regulator in two-component regulatory system with TorS. (232 aa) |
| | torD | Chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily. (215 aa) |
| | pstS2 | Phosphate-binding protein. (273 aa) |
| | VF_1618 | Methyl-accepting chemotaxis protein. (546 aa) |
| | torS | Hybrid sensory histidine kinase in two-component regulatory system with TorR. (972 aa) |
| | gacA | DNA-binding response regulator in two-component regulatory system with GacS. (214 aa) |
| | VF_1778 | Methyl-accepting chemotaxis protein. (539 aa) |
| | VF_1789 | Methyl-accepting chemotaxis protein. (697 aa) |
| | cheW | Chemotaxis coupling protein CheW. (164 aa) |
| | VF_1828 | C-terminal CheW domain, putative chemotaxis coupling protein. (352 aa) |
| | cheB | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (376 aa) |
| | cheA | Chemotactic sensory histidine kinase CheA, in two-component regulatory system with CheB and CheY. (735 aa) |
| | cheY | Chemotaxis regulator CheY, transmits signal to flagellar motor component. (122 aa) |
| | fliA | RNA polymerase, sigma-28 (sigma-F, FliA) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (243 aa) |
| | flrC | Two-component response regulator FlrC. (477 aa) |
| | flrB | Sensory histidine kinase FlrB. (353 aa) |
| | flrA | Sigma-54-dependent transcriptional activator FlrA. (493 aa) |
| | flaE | Flagellin FlaE; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (398 aa) |
| | flaD | Flagellin FlaD; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (375 aa) |
| | flaC | Flagellin FlaC; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (377 aa) |
| | flaB | Flagellin FlaB; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (377 aa) |
| | flaA | Flagellin FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (379 aa) |
| | cheR | Chemotaxis regulator, protein-glutamate methyltransferase, CheR. (275 aa) |
| | cheV1 | CheW/CheY hybrid protein CheV1. (306 aa) |
| | flgM | Flagellar anti-sigma-28 factor FlgM. (103 aa) |
| | narQ | Sensory histidine kinase in two-component regulatory system with NarP (NarL). (563 aa) |
| | narP | DNA-binding response regulator in two-component regulatory system with NarQ. (203 aa) |
| | glnB | Regulatory protein P-II for glutamine synthetase. (112 aa) |
| | glnD | Uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (873 aa) |
| | pstS | Phosphate-binding protein. (329 aa) |
| | phoR | Sensory histidine kinase in two-component regulatory system with PhoB. (431 aa) |
| | phoB | DNA-binding response regulator in two-component regulatory system with PhoR. (230 aa) |
| | VF_2042 | Methyl-accepting chemotaxis protein. (542 aa) |
| | dcuB | C4-dicarboxylate antiporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. (410 aa) |
| | flaF | Flagellin FlaF; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (377 aa) |
| | gacS | Hybrid sensory histidine kinase, in two-component regulatory system with GacA. (931 aa) |
| | arcA | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA. (239 aa) |
| | arcB | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. (788 aa) |
| | VF_2161 | Methyl-accepting chemotaxis protein. (498 aa) |
| | litR | Quorum sensing transcriptional regulator LitR (HapR). (201 aa) |
| | pilA | Pilin subunit PilA; Belongs to the N-Me-Phe pilin family. (134 aa) |
| | VF_2217 | Cytochrome c1. (245 aa) |
| | VF_2218 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (422 aa) |
| | VF_2220 | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (197 aa) |
| | degP | Serine endoprotease DegP (protease Do), periplasmic; Belongs to the peptidase S1C family. (455 aa) |
| | tolC | Transport channel. (441 aa) |
| | VF_2236 | Methyl-accepting chemotaxis protein. (533 aa) |
| | crp | DNA-binding transcriptional regulator CRP. (210 aa) |
| | frdA | Fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit. (601 aa) |
| | frdB | Fumarate reductase (anaerobic), Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (247 aa) |
| | frdC | Fumarate reductase (anaerobic), membrane anchor subunit; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (127 aa) |
| | frdD | Fumarate reductase (anaerobic), membrane anchor subunit; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (140 aa) |
| | cpxR | DNA-binding response regulator in two-component regulatory system with CpxA. (227 aa) |
| | cpxA | Sensory histidine kinase in two-component regulatory system with CpxR. (462 aa) |
| | uhpC | Membrane protein regulates uhpT expression. (446 aa) |
| | uhpB | Sensory histidine kinase in two-component regulatory sytem with UhpA. (485 aa) |
| | uhpA | DNA-binding response regulator in two-component regulatory system wtih UhpB. (202 aa) |
| | uhpT | Hexose phosphate transporter. (464 aa) |
| | VF_A0092 | Methyl-accepting chemotaxis protein, putative aerotaxis receptor. (518 aa) |
| | VF_A0102 | Two component sensor histidine kinase. (565 aa) |
| | VF_A0103 | Two component response regulator. (205 aa) |
| | VF_A0107 | Methyl-accepting chemotaxis protein. (606 aa) |
| | VF_A0169 | Methyl-accepting chemotaxis protein. (543 aa) |
| | VF_A0170 | Methyl-accepting chemotaxis protein. (541 aa) |
| | cusS | Sensory histidine kinase in two-component regulatory system with CusR, senses copper ions; Member of a two-component regulatory system. (446 aa) |
| | cusR | DNA-binding response regulator in two-component regulatory system with CusS. (226 aa) |
| | motA2 | Flagellar motor protein MotA2. (260 aa) |
| | torC | Trimethylamine N-oxide reductase, cytochrome c-type subunit; Belongs to the TorC/TorY family. (392 aa) |
| | torA | Trimethylamine N-oxide (TMAO) reductase I, catalytic subunit. (952 aa) |
| | VF_A0325 | Methyl-accepting chemotaxis protein. (561 aa) |
| | VF_A0389 | Methyl-accepting chemotaxis protein. (621 aa) |
| | cusB | Copper/silver efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (489 aa) |
| | cusA | Copper/silver efflux system, membrane component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1039 aa) |
| | VF_A0447 | Methyl-accepting chemotaxis protein. (542 aa) |
| | VF_A0448 | Methyl-accepting chemotaxis protein. (542 aa) |
| | VF_A0528 | Methyl-accepting chemotaxis protein. (547 aa) |
| | VF_A0555 | Phosphate-binding protein. (270 aa) |
| | VF_A0677 | Methyl-accepting chemotaxis protein. (637 aa) |
| | cheV3 | CheW/CheY hybrid protein CheV3. (298 aa) |
| | cheV2 | CheW/CheY hybrid protein CheV2. (313 aa) |
| | luxE | Long-chain-fatty-acid ligase LuxE. (376 aa) |
| | luxB | Luciferase beta chain LuxB. (326 aa) |
| | luxA | Luciferase alpha chain LuxA. (355 aa) |
| | luxD | Acyl transferase LuxD; Acyl transferase is part of the fatty acid reductase system required for aldehyde biosynthesis; it produces fatty acids for the luminescent reaction; Belongs to the LuxD family. (307 aa) |
| | luxC | acyl-CoA reductase LuxC; LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. (479 aa) |
| | sypG | Sigma-54 dependent transcriptional regulator; Syp polysaccharide locus. (500 aa) |
| | VF_A1069 | Methyl-accepting chemotaxis protein. (531 aa) |
| | VF_A1071 | Methyl-accepting chemotaxis protein, putative aerotaxis receptor. (509 aa) |
| | VF_A1072 | Methyl-accepting chemotaxis protein. (524 aa) |
| | VF_A1084 | Methyl-accepting chemotaxis protein. (624 aa) |
