STRINGSTRING
Cre-emb-9 Cre-emb-9 Cre-nid-1 Cre-nid-1 Cre-cle-1 Cre-cle-1 Cre-unc-52 Cre-unc-52 Cre-let-2 Cre-let-2 Cre-pat-2 Cre-pat-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-emb-9CRE-EMB-9 protein. (1804 aa)
Cre-nid-1CRE-NID-1 protein. (1609 aa)
Cre-cle-1CRE-CLE-1 protein. (1235 aa)
Cre-unc-52CRE-UNC-52 protein. (3425 aa)
Cre-let-2CRE-LET-2 protein. (1293 aa)
Cre-pat-2CRE-PAT-2 protein; Belongs to the integrin alpha chain family. (1225 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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