STRINGSTRING
CRE_09236 CRE_09236 Cre-syx-5 Cre-syx-5 Cre-snb-2 Cre-snb-2 Cre-memb-2 Cre-memb-2 CRE_29781 CRE_29781 CRE_03107 CRE_03107 CRE_04815 CRE_04815 Cre-snap-1 Cre-snap-1 CRE_10100 CRE_10100 Cre-ykt-6 Cre-ykt-6 Cre-gos-28 Cre-gos-28 Cre-sec-22 Cre-sec-22 Cre-memb-1 Cre-memb-1 CRE_21276 CRE_21276 Cre-nbet-1 Cre-nbet-1 CRE_14149 CRE_14149 CRE_13699 CRE_13699 CRE_16412 CRE_16412 Cre-syn-16 Cre-syn-16
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRE_09236Uncharacterized protein. (747 aa)
Cre-syx-5CRE-SYX-5 protein; Belongs to the syntaxin family. (414 aa)
Cre-snb-2CRE-SNB-2 protein. (114 aa)
Cre-memb-2CRE-MEMB-2 protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (216 aa)
CRE_29781t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (235 aa)
CRE_03107Uncharacterized protein. (289 aa)
CRE_04815Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (662 aa)
Cre-snap-1CRE-SNAP-1 protein. (296 aa)
CRE_10100Uncharacterized protein. (949 aa)
Cre-ykt-6CRE-YKT-6 protein; Belongs to the synaptobrevin family. (201 aa)
Cre-gos-28Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (234 aa)
Cre-sec-22CRE-SEC-22 protein; Belongs to the synaptobrevin family. (214 aa)
Cre-memb-1CRE-MEMB-1 protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (213 aa)
CRE_21276Uncharacterized protein. (297 aa)
Cre-nbet-1CRE-NBET-1 protein. (106 aa)
CRE_14149FLYWCH-type domain-containing protein. (550 aa)
CRE_13699Uncharacterized protein. (350 aa)
CRE_16412t-SNARE coiled-coil homology domain-containing protein. (222 aa)
Cre-syn-16CRE-SYN-16 protein. (329 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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