(20 nodes) Rho GTPase activation protein, and Long-term memory network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_00465	Uncharacterized protein. (557 aa)
	Cre-gap-1	CRE-GAP-1 protein. (609 aa)
	CRE_00254	Rho-GAP domain-containing protein. (737 aa)
	CRE_03755	Uncharacterized protein. (351 aa)
	CRE_03756	Uncharacterized protein. (642 aa)
	Cre-rga-4	CRE-RGA-4 protein. (1148 aa)
	CRE_11854	Rho-GAP domain-containing protein. (345 aa)
	Cre-gap-2	CRE-GAP-2 protein. (1481 aa)
	CRE_20427	Uncharacterized protein. (232 aa)
	Cre-rga-6	CRE-RGA-6 protein. (991 aa)
	CRE_06980	B box-type domain-containing protein. (471 aa)
	CRE_13740	Uncharacterized protein. (372 aa)
	CRE_08566	Uncharacterized protein. (467 aa)
	CRE_08567	Uncharacterized protein. (410 aa)
	Cre-rga-5	CRE-RGA-5 protein. (1359 aa)
	CRE_01397	Uncharacterized protein. (184 aa)
	CRE_24324	Uncharacterized protein. (438 aa)
	CRE_22242	Uncharacterized protein. (592 aa)
	CRE_13218	Rho-GAP domain-containing protein. (271 aa)
	CRE_16569	Rho-GAP domain-containing protein. (446 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_00254	CRE_01397	E3LE35	E3NHV4	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.728
CRE_00254	CRE_06980	E3LE35	E3NB47	Rho-GAP domain-containing protein.	B box-type domain-containing protein.	0.577
CRE_00254	CRE_08566	E3LE35	E3NGZ6	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.563
CRE_00254	CRE_08567	E3LE35	E3NGZ7	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.669
CRE_00254	CRE_11854	E3LE35	E3M437	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.947
CRE_00254	CRE_13218	E3LE35	E3NTJ2	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.676
CRE_00254	CRE_13740	E3LE35	E3NEX1	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.625
CRE_00254	CRE_16569	E3LE35	E3NTT8	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.686
CRE_00254	CRE_22242	E3LE35	E3NSL5	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.642
CRE_00254	CRE_24324	E3LE35	E3NQG8	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.642
CRE_00254	Cre-rga-4	E3LE35	E3M005	Rho-GAP domain-containing protein.	CRE-RGA-4 protein.	0.728
CRE_00254	Cre-rga-5	E3LE35	E3NH88	Rho-GAP domain-containing protein.	CRE-RGA-5 protein.	0.642
CRE_00254	Cre-rga-6	E3LE35	E3MXL1	Rho-GAP domain-containing protein.	CRE-RGA-6 protein.	0.720
CRE_00465	CRE_03755	E3LCZ3	E3LY36	Uncharacterized protein.	Uncharacterized protein.	0.785
CRE_00465	CRE_03756	E3LCZ3	E3LY37	Uncharacterized protein.	Uncharacterized protein.	0.785
CRE_00465	CRE_06980	E3LCZ3	E3NB47	Uncharacterized protein.	B box-type domain-containing protein.	0.558
CRE_00465	Cre-gap-2	E3LCZ3	E3MAX7	Uncharacterized protein.	CRE-GAP-2 protein.	0.893
CRE_01397	CRE_00254	E3NHV4	E3LE35	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.728
CRE_01397	CRE_06980	E3NHV4	E3NB47	Uncharacterized protein.	B box-type domain-containing protein.	0.668
CRE_01397	CRE_11854	E3NHV4	E3M437	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.696