(6 nodes) Armadillo repeat domain binding, and Nuclear hormone receptor family 5 network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_22475	Uncharacterized protein. (733 aa)
	CRE_21354	F-box domain-containing protein. (448 aa)
	CRE_20812	Uncharacterized protein. (465 aa)
	Cre-nhr-25	CRE-NHR-25 protein. (568 aa)
	CRE_07042	Nuclear receptor domain-containing protein. (325 aa)
	CRE_21088	Uncharacterized protein. (298 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_07042	CRE_20812	E3NGW4	E3MUY2	Nuclear receptor domain-containing protein.	Uncharacterized protein.	0.568
CRE_07042	CRE_22475	E3NGW4	E3MDV4	Nuclear receptor domain-containing protein.	Uncharacterized protein.	0.601
CRE_07042	Cre-nhr-25	E3NGW4	E3MVJ2	Nuclear receptor domain-containing protein.	CRE-NHR-25 protein.	0.568
CRE_20812	CRE_07042	E3MUY2	E3NGW4	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.568
CRE_20812	CRE_21088	E3MUY2	E3NTA4	Uncharacterized protein.	Uncharacterized protein.	0.556
CRE_20812	CRE_21354	E3MUY2	E3MUW7	Uncharacterized protein.	F-box domain-containing protein.	0.556
CRE_21088	CRE_20812	E3NTA4	E3MUY2	Uncharacterized protein.	Uncharacterized protein.	0.556
CRE_21088	CRE_22475	E3NTA4	E3MDV4	Uncharacterized protein.	Uncharacterized protein.	0.556
CRE_21088	Cre-nhr-25	E3NTA4	E3MVJ2	Uncharacterized protein.	CRE-NHR-25 protein.	0.556
CRE_21354	CRE_20812	E3MUW7	E3MUY2	F-box domain-containing protein.	Uncharacterized protein.	0.556
CRE_21354	CRE_22475	E3MUW7	E3MDV4	F-box domain-containing protein.	Uncharacterized protein.	0.556
CRE_21354	Cre-nhr-25	E3MUW7	E3MVJ2	F-box domain-containing protein.	CRE-NHR-25 protein.	0.556
CRE_22475	CRE_07042	E3MDV4	E3NGW4	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.601
CRE_22475	CRE_21088	E3MDV4	E3NTA4	Uncharacterized protein.	Uncharacterized protein.	0.556
CRE_22475	CRE_21354	E3MDV4	E3MUW7	Uncharacterized protein.	F-box domain-containing protein.	0.556
Cre-nhr-25	CRE_07042	E3MVJ2	E3NGW4	CRE-NHR-25 protein.	Nuclear receptor domain-containing protein.	0.568
Cre-nhr-25	CRE_21088	E3MVJ2	E3NTA4	CRE-NHR-25 protein.	Uncharacterized protein.	0.556
Cre-nhr-25	CRE_21354	E3MVJ2	E3MUW7	CRE-NHR-25 protein.	F-box domain-containing protein.	0.556