30 items (Caenorhabditis remanei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-mom-1	CRE-MOM-1 protein; Belongs to the membrane-bound acyltransferase family. (444 aa)
	Cre-lin-18	CRE-LIN-18 protein. (573 aa)
	Cre-mig-5	CRE-MIG-5 protein. (680 aa)
	Cre-cfz-2	CRE-CFZ-2 protein; Belongs to the G-protein coupled receptor Fz/Smo family. (573 aa)
	Cre-lin-17	CRE-LIN-17 protein; Belongs to the G-protein coupled receptor Fz/Smo family. (557 aa)
	CRE_26493	EGF-like domain-containing protein. (926 aa)
	Cre-mom-2	CRE-MOM-2 protein. (366 aa)
	Cre-vang-1	Vang-like protein. (540 aa)
	CRE_08041	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (212 aa)
	CRE_08248	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (569 aa)
	Cre-mig-14	CRE-MIG-14 protein. (561 aa)
	Cre-dsh-2	CRE-DSH-2 protein. (718 aa)
	CRE_11921	Uncharacterized protein. (73 aa)
	Cre-dsh-1	CRE-DSH-1 protein. (934 aa)
	CRE_11923	DIX domain-containing protein. (254 aa)
	Cre-tag-224	CRE-TAG-224 protein. (464 aa)
	Cre-mig-1	CRE-MIG-1 protein; Belongs to the G-protein coupled receptor Fz/Smo family. (649 aa)
	Cre-lin-44	CRE-LIN-44 protein. (360 aa)
	Cre-egl-20	CRE-EGL-20 protein. (393 aa)
	Cre-cwn-2	CRE-CWN-2 protein. (360 aa)
	CRE_16829	Uncharacterized protein. (314 aa)
	Cre-prkl-1	CRE-PRKL-1 protein. (518 aa)
	CRE_31543	Uncharacterized protein. (87 aa)
	Cre-cwn-1	CRE-CWN-1 protein. (406 aa)
	CRE_29268	Uncharacterized protein. (52 aa)
	CRE_15138	PET domain-containing protein. (179 aa)
	CRE_20155	Uncharacterized protein. (482 aa)
	CRE_16580	Uncharacterized protein. (193 aa)
	CRE_07981	Uncharacterized protein. (179 aa)
	CRE_07982	Uncharacterized protein. (149 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_07981	CRE_08041	E3NWS7	E3M313	Uncharacterized protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.953
CRE_07981	CRE_08248	E3NWS7	E3M394	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.934
CRE_07981	CRE_11921	E3NWS7	E3M4H4	Uncharacterized protein.	Uncharacterized protein.	0.778
CRE_07981	CRE_11923	E3NWS7	E3M4H6	Uncharacterized protein.	DIX domain-containing protein.	0.847
CRE_07981	CRE_16580	E3NWS7	E3NUH1	Uncharacterized protein.	Uncharacterized protein.	0.642
CRE_07981	CRE_16829	E3NWS7	E3MS81	Uncharacterized protein.	Uncharacterized protein.	0.925
CRE_07981	CRE_26493	E3NWS7	E3LQU5	Uncharacterized protein.	EGF-like domain-containing protein.	0.785
CRE_07981	CRE_29268	E3NWS7	E3NPP3	Uncharacterized protein.	Uncharacterized protein.	0.925
CRE_07981	CRE_31543	E3NWS7	E3NI49	Uncharacterized protein.	Uncharacterized protein.	0.505
CRE_07981	Cre-cfz-2	E3NWS7	E3LJT9	Uncharacterized protein.	CRE-CFZ-2 protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.963
CRE_07981	Cre-cwn-1	E3NWS7	E3NMD3	Uncharacterized protein.	CRE-CWN-1 protein.	0.541
CRE_07981	Cre-dsh-1	E3NWS7	E3M4H5	Uncharacterized protein.	CRE-DSH-1 protein.	0.909
CRE_07981	Cre-dsh-2	E3NWS7	E3M4D9	Uncharacterized protein.	CRE-DSH-2 protein.	0.881
CRE_07981	Cre-egl-20	E3NWS7	E3MLW6	Uncharacterized protein.	CRE-EGL-20 protein.	0.555
CRE_07981	Cre-lin-17	E3NWS7	E3LM68	Uncharacterized protein.	CRE-LIN-17 protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.994
CRE_07981	Cre-lin-18	E3NWS7	E3LEQ0	Uncharacterized protein.	CRE-LIN-18 protein.	0.939
CRE_07981	Cre-lin-44	E3NWS7	E3MGF0	Uncharacterized protein.	CRE-LIN-44 protein.	0.705
CRE_07981	Cre-mig-1	E3NWS7	E3MFM0	Uncharacterized protein.	CRE-MIG-1 protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.931
CRE_07981	Cre-mig-14	E3NWS7	E3M402	Uncharacterized protein.	CRE-MIG-14 protein.	0.942
CRE_07981	Cre-mig-5	E3NWS7	E3LGT0	Uncharacterized protein.	CRE-MIG-5 protein.	0.876