(8 nodes) Condensin complex, and Condensation of Prometaphase Chromosomes network (Caenorhabditis remanei)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_02183	SMC_N domain-containing protein. (577 aa)
	Cre-capg-2	CRE-CAPG-2 protein. (1025 aa)
	CRE_26151	Cnd3 domain-containing protein. (1117 aa)
	Cre-dpy-28	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1459 aa)
	CRE_20350	SMC_N domain-containing protein. (470 aa)
	Cre-smc-4	CRE-SMC-4 protein. (1072 aa)
	Cre-kle-2	CRE-KLE-2 protein. (897 aa)
	Cre-hcp-6	CRE-HCP-6 protein. (1147 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_02183	CRE_20350	E3LFI8	E3MCW9	SMC_N domain-containing protein.	SMC_N domain-containing protein.	0.996
CRE_02183	CRE_26151	E3LFI8	E3LQG3	SMC_N domain-containing protein.	Cnd3 domain-containing protein.	0.997
CRE_02183	Cre-capg-2	E3LFI8	E3LQ47	SMC_N domain-containing protein.	CRE-CAPG-2 protein.	0.982
CRE_02183	Cre-dpy-28	E3LFI8	E3LYD6	SMC_N domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.999
CRE_02183	Cre-hcp-6	E3LFI8	E3NFG0	SMC_N domain-containing protein.	CRE-HCP-6 protein.	0.975
CRE_02183	Cre-kle-2	E3LFI8	E3ML06	SMC_N domain-containing protein.	CRE-KLE-2 protein.	0.987
CRE_02183	Cre-smc-4	E3LFI8	E3MCX0	SMC_N domain-containing protein.	CRE-SMC-4 protein.	0.995
CRE_20350	CRE_02183	E3MCW9	E3LFI8	SMC_N domain-containing protein.	SMC_N domain-containing protein.	0.996
CRE_20350	CRE_26151	E3MCW9	E3LQG3	SMC_N domain-containing protein.	Cnd3 domain-containing protein.	0.995
CRE_20350	Cre-capg-2	E3MCW9	E3LQ47	SMC_N domain-containing protein.	CRE-CAPG-2 protein.	0.949
CRE_20350	Cre-dpy-28	E3MCW9	E3LYD6	SMC_N domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.996
CRE_20350	Cre-hcp-6	E3MCW9	E3NFG0	SMC_N domain-containing protein.	CRE-HCP-6 protein.	0.950
CRE_20350	Cre-kle-2	E3MCW9	E3ML06	SMC_N domain-containing protein.	CRE-KLE-2 protein.	0.977
CRE_20350	Cre-smc-4	E3MCW9	E3MCX0	SMC_N domain-containing protein.	CRE-SMC-4 protein.	0.946
CRE_26151	CRE_02183	E3LQG3	E3LFI8	Cnd3 domain-containing protein.	SMC_N domain-containing protein.	0.997
CRE_26151	CRE_20350	E3LQG3	E3MCW9	Cnd3 domain-containing protein.	SMC_N domain-containing protein.	0.995
CRE_26151	Cre-capg-2	E3LQG3	E3LQ47	Cnd3 domain-containing protein.	CRE-CAPG-2 protein.	0.700
CRE_26151	Cre-dpy-28	E3LQG3	E3LYD6	Cnd3 domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.998
CRE_26151	Cre-hcp-6	E3LQG3	E3NFG0	Cnd3 domain-containing protein.	CRE-HCP-6 protein.	0.523
CRE_26151	Cre-kle-2	E3LQG3	E3ML06	Cnd3 domain-containing protein.	CRE-KLE-2 protein.	0.626