(6 nodes) Formin, GTPase-binding domain, and Terminal web network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_18831	Drf_GBD domain-containing protein. (212 aa)
	Cre-act-5	CRE-ACT-5 protein. (375 aa)
	Cre-pfn-3	Profilin; Belongs to the profilin family. (126 aa)
	CRE_31202	Uncharacterized protein. (1334 aa)
	Cre-frl-1	CRE-FRL-1 protein. (1119 aa)
	CRE_07165	Uncharacterized protein. (155 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_07165	CRE_18831	E3NT15	E3LKR3	Uncharacterized protein.	Drf_GBD domain-containing protein.	0.864
CRE_07165	CRE_31202	E3NT15	E3MLJ7	Uncharacterized protein.	Uncharacterized protein.	0.868
CRE_07165	Cre-act-5	E3NT15	E3LYI9	Uncharacterized protein.	CRE-ACT-5 protein.	0.702
CRE_07165	Cre-frl-1	E3NT15	E3ND51	Uncharacterized protein.	CRE-FRL-1 protein.	0.946
CRE_07165	Cre-pfn-3	E3NT15	E3MA14	Uncharacterized protein.	Profilin; Belongs to the profilin family.	0.820
CRE_18831	CRE_07165	E3LKR3	E3NT15	Drf_GBD domain-containing protein.	Uncharacterized protein.	0.864
CRE_18831	CRE_31202	E3LKR3	E3MLJ7	Drf_GBD domain-containing protein.	Uncharacterized protein.	0.759
CRE_18831	Cre-act-5	E3LKR3	E3LYI9	Drf_GBD domain-containing protein.	CRE-ACT-5 protein.	0.785
CRE_18831	Cre-frl-1	E3LKR3	E3ND51	Drf_GBD domain-containing protein.	CRE-FRL-1 protein.	0.788
CRE_18831	Cre-pfn-3	E3LKR3	E3MA14	Drf_GBD domain-containing protein.	Profilin; Belongs to the profilin family.	0.928
CRE_31202	CRE_07165	E3MLJ7	E3NT15	Uncharacterized protein.	Uncharacterized protein.	0.868
CRE_31202	CRE_18831	E3MLJ7	E3LKR3	Uncharacterized protein.	Drf_GBD domain-containing protein.	0.759
CRE_31202	Cre-act-5	E3MLJ7	E3LYI9	Uncharacterized protein.	CRE-ACT-5 protein.	0.851
CRE_31202	Cre-frl-1	E3MLJ7	E3ND51	Uncharacterized protein.	CRE-FRL-1 protein.	0.784
CRE_31202	Cre-pfn-3	E3MLJ7	E3MA14	Uncharacterized protein.	Profilin; Belongs to the profilin family.	0.961
Cre-act-5	CRE_07165	E3LYI9	E3NT15	CRE-ACT-5 protein.	Uncharacterized protein.	0.702
Cre-act-5	CRE_18831	E3LYI9	E3LKR3	CRE-ACT-5 protein.	Drf_GBD domain-containing protein.	0.785
Cre-act-5	CRE_31202	E3LYI9	E3MLJ7	CRE-ACT-5 protein.	Uncharacterized protein.	0.851
Cre-act-5	Cre-frl-1	E3LYI9	E3ND51	CRE-ACT-5 protein.	CRE-FRL-1 protein.	0.774
Cre-act-5	Cre-pfn-3	E3LYI9	E3MA14	CRE-ACT-5 protein.	Profilin; Belongs to the profilin family.	0.999