(21 nodes) Mixed, incl. Protein tyrosine/serine/threonine phosphatase activity, and Regulation of membrane tubulation network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-sax-1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (475 aa)
	CRE_18921	Uncharacterized protein. (657 aa)
	Cre-mtk-1	CRE-MTK-1 protein. (1384 aa)
	Cre-cdc-14	CRE-CDC-14 protein. (767 aa)
	CRE_11991	Uncharacterized protein. (946 aa)
	CRE_11993	Uncharacterized protein. (384 aa)
	CRE_11994	Uncharacterized protein. (337 aa)
	CRE_12700	Uncharacterized protein. (460 aa)
	CRE_15433	Uncharacterized protein. (757 aa)
	CRE_20329	Uncharacterized protein. (383 aa)
	CRE_22451	Uncharacterized protein. (1352 aa)
	CRE_01047	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (645 aa)
	CRE_19172	Uncharacterized protein. (356 aa)
	CRE_07662	Uncharacterized protein. (798 aa)
	CRE_15464	Uncharacterized protein. (193 aa)
	CRE_20436	Uncharacterized protein. (326 aa)
	CRE_19541	Uncharacterized protein. (102 aa)
	CRE_26850	Uncharacterized protein. (765 aa)
	CRE_13152	Uncharacterized protein. (321 aa)
	CRE_11553	Uncharacterized protein. (460 aa)
	CRE_02754	Uncharacterized protein. (248 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_01047	CRE_11553	E3MI21	E3NN23	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Uncharacterized protein.	0.651
CRE_01047	CRE_12700	E3MI21	E3M7C1	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Uncharacterized protein.	0.651
CRE_01047	CRE_20329	E3MI21	E3MCT4	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Uncharacterized protein.	0.651
CRE_01047	CRE_20436	E3MI21	E3MT72	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Uncharacterized protein.	0.651
CRE_01047	Cre-cdc-14	E3MI21	E3M4R6	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	CRE-CDC-14 protein.	0.651
CRE_02754	CRE_15464	E3NRP8	E3MSS0	Uncharacterized protein.	Uncharacterized protein.	0.432
CRE_02754	CRE_18921	E3NRP8	E3LK14	Uncharacterized protein.	Uncharacterized protein.	0.464
CRE_02754	CRE_19172	E3NRP8	E3MJN8	Uncharacterized protein.	Uncharacterized protein.	0.432
CRE_02754	CRE_19541	E3NRP8	E3NJ89	Uncharacterized protein.	Uncharacterized protein.	0.735
CRE_02754	Cre-mtk-1	E3NRP8	E3LY86	Uncharacterized protein.	CRE-MTK-1 protein.	0.735
CRE_02754	Cre-sax-1	E3NRP8	E3LEU3	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.714
CRE_07662	CRE_11991	E3MP61	E3M4W7	Uncharacterized protein.	Uncharacterized protein.	0.595
CRE_07662	CRE_11993	E3MP61	E3M4W9	Uncharacterized protein.	Uncharacterized protein.	0.595
CRE_07662	CRE_11994	E3MP61	E3M4X1	Uncharacterized protein.	Uncharacterized protein.	0.595
CRE_07662	CRE_22451	E3MP61	E3ME86	Uncharacterized protein.	Uncharacterized protein.	0.595
CRE_11553	CRE_01047	E3NN23	E3MI21	Uncharacterized protein.	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.651
CRE_11553	CRE_11991	E3NN23	E3M4W7	Uncharacterized protein.	Uncharacterized protein.	0.694
CRE_11553	CRE_11993	E3NN23	E3M4W9	Uncharacterized protein.	Uncharacterized protein.	0.694
CRE_11553	CRE_11994	E3NN23	E3M4X1	Uncharacterized protein.	Uncharacterized protein.	0.694
CRE_11553	CRE_13152	E3NN23	E3NLK9	Uncharacterized protein.	Uncharacterized protein.	0.619