STRINGSTRING
Cre-dpy-14 Cre-dpy-14 Cre-dsl-5 Cre-dsl-5 Cre-dpy-17 Cre-dpy-17 CRE_16863 CRE_16863 CRE_08443 CRE_08443 CRE_14193 CRE_14193 Cre-col-121 Cre-col-121 CRE_13715 CRE_13715 CRE_06149 CRE_06149 CRE_06152 CRE_06152 CRE_27895 CRE_27895
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-dpy-14CRE-DPY-14 protein. (328 aa)
Cre-dsl-5Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (299 aa)
Cre-dpy-17CRE-DPY-17 protein. (373 aa)
CRE_16863Pep_M12B_propep domain-containing protein. (178 aa)
CRE_08443Zinc metalloproteinase. (444 aa)
CRE_14193Uncharacterized protein. (137 aa)
Cre-col-121CRE-COL-121 protein. (374 aa)
CRE_13715Uncharacterized protein. (335 aa)
CRE_06149Zinc metalloproteinase. (445 aa)
CRE_06152Zinc metalloproteinase. (488 aa)
CRE_27895Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (266 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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