STRINGSTRING
Cre-aph-2 Cre-aph-2 Cre-sel-12 Cre-sel-12 Cre-aph-1 Cre-aph-1 Cre-pen-2 Cre-pen-2 Cre-spe-4 Cre-spe-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-aph-2CRE-APH-2 protein. (722 aa)
Cre-sel-12Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (383 aa)
Cre-aph-1CRE-APH-1 protein. (314 aa)
Cre-pen-2CRE-PEN-2 protein. (101 aa)
Cre-spe-4CRE-SPE-4 protein. (464 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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