(32 nodes) Structural constituent of nuclear pore, and Protein targeting to lysosome network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-npp-5	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (812 aa)
	CRE_02140	Uncharacterized protein. (247 aa)
	Cre-npp-19	CRE-NPP-19 protein. (375 aa)
	Cre-npp-3	CRE-NPP-3 protein. (1716 aa)
	Cre-cyn-7	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (171 aa)
	Cre-npp-22	CRE-NPP-22 protein. (590 aa)
	CRE_25260	Uncharacterized protein. (510 aa)
	CRE_25261	GRIP domain-containing protein. (177 aa)
	CRE_02817	Uncharacterized protein. (477 aa)
	Cre-npp-7	CRE-NPP-7 protein. (1240 aa)
	Cre-npp-13	Nuclear pore protein. (785 aa)
	CRE_03746	Uncharacterized protein. (96 aa)
	CRE_04005	Uncharacterized protein. (647 aa)
	CRE_04006	Uncharacterized protein. (926 aa)
	Cre-npp-2	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (601 aa)
	CRE_04606	Uncharacterized protein. (1720 aa)
	CRE_06536	Uncharacterized protein. (630 aa)
	Cre-npp-17	CRE-NPP-17 protein. (373 aa)
	Cre-npp-14	CRE-NPP-14 protein. (1395 aa)
	CRE_11789	Uncharacterized protein. (688 aa)
	Cre-npp-11	CRE-NPP-11 protein. (769 aa)
	Cre-npp-15	CRE-NPP-15 protein. (1131 aa)
	CRE_29869	Uncharacterized protein. (349 aa)
	Cre-npp-1	CRE-NPP-1 protein. (672 aa)
	Cre-npp-12	CRE-NPP-12 protein. (1848 aa)
	Cre-npp-4	CRE-NPP-4 protein. (531 aa)
	Cre-npp-8	CRE-NPP-8 protein. (1295 aa)
	CRE_16411	Uncharacterized protein. (356 aa)
	Cre-npp-6	CRE-NPP-6 protein. (1474 aa)
	Cre-npp-10	CRE-NPP-10 protein. (1696 aa)
	CRE_04424	Uncharacterized protein. (349 aa)
	CRE_04425	Uncharacterized protein. (245 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_02140	CRE_03746	E3LF95	E3LY20	Uncharacterized protein.	Uncharacterized protein.	0.920
CRE_02140	CRE_04005	E3LF95	E3LYB4	Uncharacterized protein.	Uncharacterized protein.	0.887
CRE_02140	CRE_04006	E3LF95	E3LYB7	Uncharacterized protein.	Uncharacterized protein.	0.887
CRE_02140	CRE_04424	E3LF95	E3NPT7	Uncharacterized protein.	Uncharacterized protein.	0.890
CRE_02140	CRE_04425	E3LF95	E3NPT8	Uncharacterized protein.	Uncharacterized protein.	0.890
CRE_02140	CRE_04606	E3LF95	E3LZD9	Uncharacterized protein.	Uncharacterized protein.	0.955
CRE_02140	CRE_06536	E3LF95	E3M1F9	Uncharacterized protein.	Uncharacterized protein.	0.887
CRE_02140	CRE_11789	E3LF95	E3M4P3	Uncharacterized protein.	Uncharacterized protein.	0.912
CRE_02140	CRE_16411	E3LF95	E3NC49	Uncharacterized protein.	Uncharacterized protein.	0.887
CRE_02140	CRE_25260	E3LF95	E3LS79	Uncharacterized protein.	Uncharacterized protein.	0.887
CRE_02140	CRE_25261	E3LF95	E3LS81	Uncharacterized protein.	GRIP domain-containing protein.	0.887
CRE_02140	CRE_29869	E3LF95	E3MLX2	Uncharacterized protein.	Uncharacterized protein.	0.890
CRE_02140	Cre-cyn-7	E3LF95	E3LLL2	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.818
CRE_02140	Cre-npp-1	E3LF95	E3MLX3	Uncharacterized protein.	CRE-NPP-1 protein.	0.890
CRE_02140	Cre-npp-11	E3LF95	E3MG97	Uncharacterized protein.	CRE-NPP-11 protein.	0.960
CRE_02140	Cre-npp-12	E3LF95	E3MVW0	Uncharacterized protein.	CRE-NPP-12 protein.	0.895
CRE_02140	Cre-npp-13	E3LF95	E3LY18	Uncharacterized protein.	Nuclear pore protein.	0.920
CRE_02140	Cre-npp-14	E3LF95	E3M3U0	Uncharacterized protein.	CRE-NPP-14 protein.	0.958
CRE_02140	Cre-npp-15	E3LF95	E3MKY2	Uncharacterized protein.	CRE-NPP-15 protein.	0.960
CRE_02140	Cre-npp-17	E3LF95	E3M357	Uncharacterized protein.	CRE-NPP-17 protein.	0.957