19 items (Caenorhabditis remanei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-rpn-9	CRE-RPN-9 protein. (390 aa)
	Cre-pas-7	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (250 aa)
	Cre-pbs-6	Proteasome subunit beta. (258 aa)
	Cre-pas-1	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (246 aa)
	Cre-pas-6	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (271 aa)
	Cre-pbs-7	Proteasome subunit beta; Belongs to the peptidase T1B family. (236 aa)
	Cre-pas-4	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (253 aa)
	Cre-pas-5	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (258 aa)
	CRE_06288	MPN domain-containing protein. (323 aa)
	Cre-pbs-3	Proteasome subunit beta. (204 aa)
	CRE_11090	PCI domain-containing protein. (489 aa)
	Cre-pbs-4	Proteasome subunit beta. (204 aa)
	Cre-rpn-8	CRE-RPN-8 protein. (362 aa)
	Cre-pas-3	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (250 aa)
	Cre-pbs-5	CRE-PBS-5 protein. (284 aa)
	Cre-pbs-2	CRE-PBS-2 protein. (290 aa)
	Cre-rpn-7	CRE-RPN-7 protein. (409 aa)
	Cre-pbs-1	Proteasome subunit beta. (239 aa)
	Cre-pas-2	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (231 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_06288	CRE_11090	E3M0Y8	E3M5G9	MPN domain-containing protein.	PCI domain-containing protein.	0.996
CRE_06288	Cre-pas-1	E3M0Y8	E3LTJ8	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.990
CRE_06288	Cre-pas-2	E3M0Y8	E3NLX3	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.995
CRE_06288	Cre-pas-3	E3M0Y8	E3MX85	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.997
CRE_06288	Cre-pas-4	E3M0Y8	E3LVJ7	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.989
CRE_06288	Cre-pas-5	E3M0Y8	E3LVZ0	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.997
CRE_06288	Cre-pas-6	E3M0Y8	E3LUB3	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.998
CRE_06288	Cre-pas-7	E3M0Y8	E3LH09	MPN domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.996
CRE_06288	Cre-pbs-1	E3M0Y8	E3NBS6	MPN domain-containing protein.	Proteasome subunit beta.	0.990
CRE_06288	Cre-pbs-2	E3M0Y8	E3N2P4	MPN domain-containing protein.	CRE-PBS-2 protein.	0.991
CRE_06288	Cre-pbs-3	E3M0Y8	E3M4A8	MPN domain-containing protein.	Proteasome subunit beta.	0.987
CRE_06288	Cre-pbs-4	E3M0Y8	E3MGC3	MPN domain-containing protein.	Proteasome subunit beta.	0.996
CRE_06288	Cre-pbs-5	E3M0Y8	E3N1M6	MPN domain-containing protein.	CRE-PBS-5 protein.	0.988
CRE_06288	Cre-pbs-6	E3M0Y8	E3LT15	MPN domain-containing protein.	Proteasome subunit beta.	0.990
CRE_06288	Cre-pbs-7	E3M0Y8	E3LVJ2	MPN domain-containing protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.991
CRE_06288	Cre-rpn-7	E3M0Y8	E3N5P5	MPN domain-containing protein.	CRE-RPN-7 protein.	0.997
CRE_06288	Cre-rpn-8	E3M0Y8	E3MGH3	MPN domain-containing protein.	CRE-RPN-8 protein.	0.999
CRE_06288	Cre-rpn-9	E3M0Y8	E3LFC8	MPN domain-containing protein.	CRE-RPN-9 protein.	0.999
CRE_11090	CRE_06288	E3M5G9	E3M0Y8	PCI domain-containing protein.	MPN domain-containing protein.	0.996
CRE_11090	Cre-pas-1	E3M5G9	E3LTJ8	PCI domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.986