(37 nodes) Regulation of centrosome duplication network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_10156	SUN domain-containing protein. (444 aa)
	CRE_10155	SUN domain-containing protein. (411 aa)
	CRE_30298	SUN domain-containing protein. (430 aa)
	CRE_07925	SUN domain-containing protein. (413 aa)
	CRE_07926	SUN domain-containing protein. (406 aa)
	CRE_07927	SUN domain-containing protein. (443 aa)
	CRE_07924	SUN domain-containing protein. (338 aa)
	CRE_24892	SUN domain-containing protein. (467 aa)
	CRE_29381	SUN domain-containing protein. (422 aa)
	CRE_09941	SUN domain-containing protein. (351 aa)
	Cre-tag-319	CRE-TAG-319 protein. (747 aa)
	Cre-lin-23	CRE-LIN-23 protein. (672 aa)
	Cre-szy-20	CRE-SZY-20 protein. (529 aa)
	Cre-sun-1	CRE-SUN-1 protein. (507 aa)
	Cre-atx-2	CRE-ATX-2 protein. (1020 aa)
	Cre-sel-10	CRE-SEL-10 protein. (590 aa)
	CRE_10914	SUN domain-containing protein. (433 aa)
	CRE_10915	SUN domain-containing protein. (408 aa)
	CRE_11130	SUN domain-containing protein. (445 aa)
	CRE_10957	SUN domain-containing protein. (628 aa)
	CRE_10965	SUN domain-containing protein. (427 aa)
	CRE_10013	SUN domain-containing protein. (467 aa)
	CRE_10011	SUN domain-containing protein. (440 aa)
	CRE_10173	SUN domain-containing protein. (683 aa)
	CRE_17181	F-box domain-containing protein. (530 aa)
	CRE_04063	LRRcap domain-containing protein. (344 aa)
	CRE_08413	Protein kinase domain-containing protein. (628 aa)
	CRE_16277	Uncharacterized protein. (1074 aa)
	CRE_24215	Uncharacterized protein. (1559 aa)
	CRE_23130	Protein kinase domain-containing protein. (615 aa)
	CRE_26855	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (751 aa)
	CRE_30297	SUN domain-containing protein. (408 aa)
	CRE_09972	SUN domain-containing protein. (406 aa)
	CRE_09971	SUN domain-containing protein. (569 aa)
	CRE_10158	SUN domain-containing protein. (443 aa)
	CRE_10157	SUN domain-containing protein. (406 aa)
	CRE_04576	Uncharacterized protein. (187 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_04063	CRE_04576	E3MN37	E3LZ59	LRRcap domain-containing protein.	Uncharacterized protein.	0.852
CRE_04063	CRE_08413	E3MN37	E3MPL7	LRRcap domain-containing protein.	Protein kinase domain-containing protein.	0.482
CRE_04063	CRE_23130	E3MN37	E3ND33	LRRcap domain-containing protein.	Protein kinase domain-containing protein.	0.482
CRE_04576	CRE_04063	E3LZ59	E3MN37	Uncharacterized protein.	LRRcap domain-containing protein.	0.852
CRE_07924	CRE_08413	E3NQ38	E3MPL7	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07924	CRE_23130	E3NQ38	E3ND33	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07925	CRE_08413	E3NQ34	E3MPL7	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07925	CRE_23130	E3NQ34	E3ND33	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07926	CRE_08413	E3NQ35	E3MPL7	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07926	CRE_23130	E3NQ35	E3ND33	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07927	CRE_08413	E3NQ36	E3MPL7	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_07927	CRE_23130	E3NQ36	E3ND33	SUN domain-containing protein.	Protein kinase domain-containing protein.	0.413
CRE_08413	CRE_04063	E3MPL7	E3MN37	Protein kinase domain-containing protein.	LRRcap domain-containing protein.	0.482
CRE_08413	CRE_07924	E3MPL7	E3NQ38	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413
CRE_08413	CRE_07925	E3MPL7	E3NQ34	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413
CRE_08413	CRE_07926	E3MPL7	E3NQ35	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413
CRE_08413	CRE_07927	E3MPL7	E3NQ36	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413
CRE_08413	CRE_09941	E3MPL7	E3NUG8	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413
CRE_08413	CRE_09971	E3MPL7	E3M6K9	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413
CRE_08413	CRE_09972	E3MPL7	E3M6L0	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.413