STRINGSTRING
Cre-tsp-14 Cre-tsp-14 Cre-daf-11 Cre-daf-11 Cre-tph-1 Cre-tph-1 Cre-sma-6 Cre-sma-6 Cre-sma-3 Cre-sma-3 Cre-dbl-1 Cre-dbl-1 CRE_31136 CRE_31136 Cre-ubh-1 Cre-ubh-1 Cre-sup-17 Cre-sup-17 CRE_20214 CRE_20214 Cre-tsp-12 Cre-tsp-12 CRE_03274 CRE_03274 CRE_10660 CRE_10660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-tsp-14Tetraspanin. (456 aa)
Cre-daf-11Guanylate cyclase. (1180 aa)
Cre-tph-1CRE-TPH-1 protein. (532 aa)
Cre-sma-6Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (632 aa)
Cre-sma-3Dwarfin sma. (392 aa)
Cre-dbl-1CRE-DBL-1 protein. (373 aa)
CRE_31136Ubiquitin carboxyl-terminal hydrolase. (238 aa)
Cre-ubh-1Ubiquitin carboxyl-terminal hydrolase. (216 aa)
Cre-sup-17CRE-SUP-17 protein. (935 aa)
CRE_20214PDZ domain-containing protein. (377 aa)
Cre-tsp-12Tetraspanin. (308 aa)
CRE_03274Tetraspanin. (305 aa)
CRE_10660Uncharacterized protein. (881 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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