(12 nodes) Establishment or maintenance of actin cytoskeleton polarity network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_13857	Amidohydro-rel domain-containing protein. (276 aa)
	Cre-unc-6	CRE-UNC-6 protein. (612 aa)
	Cre-mig-2	CRE-MIG-2 protein. (195 aa)
	Cre-unc-73	CRE-UNC-73 protein. (2483 aa)
	Cre-unc-5	CRE-UNC-5 protein. (920 aa)
	Cre-unc-33	CRE-UNC-33 protein. (907 aa)
	CRE_16921	Uncharacterized protein. (5605 aa)
	CRE_16922	Uncharacterized protein. (1866 aa)
	CRE_20102	Uncharacterized protein. (4924 aa)
	CRE_20644	Uncharacterized protein. (239 aa)
	CRE_15150	ANK_REP_REGION domain-containing protein. (956 aa)
	CRE_30335	Death domain-containing protein. (373 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_13857	CRE_15150	E3NUT4	E3NU20	Amidohydro-rel domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.461
CRE_13857	CRE_16921	E3NUT4	E3MSE6	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.555
CRE_13857	CRE_16922	E3NUT4	E3MSE7	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.461
CRE_13857	CRE_20102	E3NUT4	E3NNC3	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.555
CRE_13857	CRE_20644	E3NUT4	E3NSY5	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.555
CRE_13857	CRE_30335	E3NUT4	E3NUY5	Amidohydro-rel domain-containing protein.	Death domain-containing protein.	0.450
CRE_13857	Cre-mig-2	E3NUT4	E3M255	Amidohydro-rel domain-containing protein.	CRE-MIG-2 protein.	0.453
CRE_13857	Cre-unc-5	E3NUT4	E3MR05	Amidohydro-rel domain-containing protein.	CRE-UNC-5 protein.	0.450
CRE_13857	Cre-unc-6	E3NUT4	E3LD86	Amidohydro-rel domain-containing protein.	CRE-UNC-6 protein.	0.551
CRE_13857	Cre-unc-73	E3NUT4	E3MGG2	Amidohydro-rel domain-containing protein.	CRE-UNC-73 protein.	0.612
CRE_15150	CRE_13857	E3NU20	E3NUT4	ANK_REP_REGION domain-containing protein.	Amidohydro-rel domain-containing protein.	0.461
CRE_15150	Cre-unc-33	E3NU20	E3MRJ8	ANK_REP_REGION domain-containing protein.	CRE-UNC-33 protein.	0.461
CRE_16921	CRE_13857	E3MSE6	E3NUT4	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.555
CRE_16921	Cre-unc-33	E3MSE6	E3MRJ8	Uncharacterized protein.	CRE-UNC-33 protein.	0.555
CRE_16922	CRE_13857	E3MSE7	E3NUT4	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.461
CRE_16922	Cre-unc-33	E3MSE7	E3MRJ8	Uncharacterized protein.	CRE-UNC-33 protein.	0.461
CRE_20102	CRE_13857	E3NNC3	E3NUT4	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.555
CRE_20102	Cre-unc-33	E3NNC3	E3MRJ8	Uncharacterized protein.	CRE-UNC-33 protein.	0.555
CRE_20644	CRE_13857	E3NSY5	E3NUT4	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.555
CRE_20644	Cre-unc-33	E3NSY5	E3MRJ8	Uncharacterized protein.	CRE-UNC-33 protein.	0.555