STRINGSTRING
Cre-sel-1 Cre-sel-1 CRE_21657 CRE_21657 CRE_21947 CRE_21947 Cre-hda-1 Cre-hda-1 Cre-vav-1 Cre-vav-1 Cre-hecd-1 Cre-hecd-1 CRE_05454 CRE_05454 Cre-sel-10 Cre-sel-10 CRE_04702 CRE_04702 CRE_29561 CRE_29561 CRE_29559 CRE_29559
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-sel-1CRE-SEL-1 protein. (685 aa)
CRE_21657Uncharacterized protein. (2639 aa)
CRE_21947Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (459 aa)
Cre-hda-1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (509 aa)
Cre-vav-1CRE-VAV-1 protein. (1020 aa)
Cre-hecd-1CRE-HECD-1 protein. (2775 aa)
CRE_05454GYF domain-containing protein. (310 aa)
Cre-sel-10CRE-SEL-10 protein. (590 aa)
CRE_04702Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (446 aa)
CRE_29561Uncharacterized protein. (2089 aa)
CRE_29559Uncharacterized protein. (1025 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.