STRINGSTRING
Cre-mtm-3 Cre-mtm-3 Cre-mtm-1 Cre-mtm-1 Cre-tat-1 Cre-tat-1 CRE_19924 CRE_19924 Cre-cup-5 Cre-cup-5 CRE_01174 CRE_01174 Cre-lec-6 Cre-lec-6 CRE_24391 CRE_24391 CRE_17222 CRE_17222 Cre-srgp-1 Cre-srgp-1 CRE_12808 CRE_12808 Cre-abl-1 Cre-abl-1 Cre-swan-1 Cre-swan-1 Cre-pdr-1 Cre-pdr-1 CRE_03147 CRE_03147
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-mtm-3CRE-MTM-3 protein. (952 aa)
Cre-mtm-1CRE-MTM-1 protein. (592 aa)
Cre-tat-1Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1054 aa)
CRE_19924Uncharacterized protein. (111 aa)
Cre-cup-5CRE-CUP-5 protein. (469 aa)
CRE_01174Ion_trans domain-containing protein. (228 aa)
Cre-lec-6Galectin. (148 aa)
CRE_24391Uncharacterized protein. (352 aa)
CRE_17222WD_REPEATS_REGION domain-containing protein. (357 aa)
Cre-srgp-1CRE-SRGP-1 protein. (1059 aa)
CRE_12808Rho-GAP domain-containing protein; Belongs to the glycosyltransferase 47 family. (847 aa)
Cre-abl-1Tyrosine-protein kinase. (1287 aa)
Cre-swan-1CRE-SWAN-1 protein. (381 aa)
Cre-pdr-1E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (387 aa)
CRE_03147ANK_REP_REGION domain-containing protein. (590 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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