(26 nodes) Negative regulation of developmental growth network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-lon-2	CRE-LON-2 protein. (508 aa)
	CRE_08658	Uncharacterized protein. (407 aa)
	CRE_08659	Uncharacterized protein. (400 aa)
	CRE_08660	Uncharacterized protein. (308 aa)
	CRE_08661	Uncharacterized protein. (393 aa)
	Cre-daf-16	CRE-DAF-16 protein. (528 aa)
	Cre-lon-3	CRE-LON-3 protein. (324 aa)
	CRE_27097	Uncharacterized protein. (822 aa)
	Cre-unc-40	CRE-UNC-40 protein. (1432 aa)
	Cre-mab-20	CRE-MAB-20 protein; Belongs to the semaphorin family. (659 aa)
	Cre-lon-1	CRE-LON-1 protein; Belongs to the CRISP family. (308 aa)
	CRE_06473	Uncharacterized protein. (1078 aa)
	Cre-rig-6	CRE-RIG-6 protein. (1216 aa)
	Cre-gcy-12	Guanylate cyclase. (1689 aa)
	Cre-vhp-1	CRE-VHP-1 protein. (650 aa)
	Cre-sor-3	CRE-SOR-3 protein. (1220 aa)
	Cre-slt-1	CRE-SLT-1 protein. (857 aa)
	CRE_15303	Uncharacterized protein. (574 aa)
	Cre-fsn-1	CRE-FSN-1 protein. (346 aa)
	CRE_20242	PPM-type phosphatase domain-containing protein. (351 aa)
	Cre-glo-4	CRE-GLO-4 protein. (1411 aa)
	Cre-lon-8	CRE-LON-8 protein. (161 aa)
	Cre-smp-1	CRE-SMP-1 protein; Belongs to the semaphorin family. (711 aa)
	Cre-smp-2	CRE-SMP-2 protein; Belongs to the semaphorin family. (657 aa)
	Cre-efa-6	CRE-EFA-6 protein. (775 aa)
	CRE_30190	Uncharacterized protein. (827 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_06473	Cre-sor-3	E3M190	E3MAF3	Uncharacterized protein.	CRE-SOR-3 protein.	0.645
CRE_15303	Cre-lon-2	E3MC36	E3LEC1	Uncharacterized protein.	CRE-LON-2 protein.	0.676
CRE_15303	Cre-slt-1	E3MC36	E3MC35	Uncharacterized protein.	CRE-SLT-1 protein.	0.921
CRE_15303	Cre-unc-40	E3MC36	E3LXC8	Uncharacterized protein.	CRE-UNC-40 protein.	0.913
CRE_20242	Cre-fsn-1	E3MCV8	E3MCL3	PPM-type phosphatase domain-containing protein.	CRE-FSN-1 protein.	0.680
CRE_20242	Cre-glo-4	E3MCV8	E3MD81	PPM-type phosphatase domain-containing protein.	CRE-GLO-4 protein.	0.720
CRE_27097	Cre-lon-3	E3LQ78	E3LQ21	Uncharacterized protein.	CRE-LON-3 protein.	0.616
Cre-daf-16	Cre-vhp-1	E3LMN9	E3M4I9	CRE-DAF-16 protein.	CRE-VHP-1 protein.	0.619
Cre-fsn-1	CRE_20242	E3MCL3	E3MCV8	CRE-FSN-1 protein.	PPM-type phosphatase domain-containing protein.	0.680
Cre-fsn-1	Cre-glo-4	E3MCL3	E3MD81	CRE-FSN-1 protein.	CRE-GLO-4 protein.	0.921
Cre-glo-4	CRE_20242	E3MD81	E3MCV8	CRE-GLO-4 protein.	PPM-type phosphatase domain-containing protein.	0.720
Cre-glo-4	Cre-fsn-1	E3MD81	E3MCL3	CRE-GLO-4 protein.	CRE-FSN-1 protein.	0.921
Cre-lon-1	Cre-lon-2	E3LZ37	E3LEC1	CRE-LON-1 protein; Belongs to the CRISP family.	CRE-LON-2 protein.	0.802
Cre-lon-1	Cre-lon-3	E3LZ37	E3LQ21	CRE-LON-1 protein; Belongs to the CRISP family.	CRE-LON-3 protein.	0.772
Cre-lon-1	Cre-lon-8	E3LZ37	E3MF96	CRE-LON-1 protein; Belongs to the CRISP family.	CRE-LON-8 protein.	0.573
Cre-lon-2	CRE_15303	E3LEC1	E3MC36	CRE-LON-2 protein.	Uncharacterized protein.	0.676
Cre-lon-2	Cre-lon-1	E3LEC1	E3LZ37	CRE-LON-2 protein.	CRE-LON-1 protein; Belongs to the CRISP family.	0.802
Cre-lon-2	Cre-lon-3	E3LEC1	E3LQ21	CRE-LON-2 protein.	CRE-LON-3 protein.	0.640
Cre-lon-2	Cre-lon-8	E3LEC1	E3MF96	CRE-LON-2 protein.	CRE-LON-8 protein.	0.426
Cre-lon-2	Cre-slt-1	E3LEC1	E3MC35	CRE-LON-2 protein.	CRE-SLT-1 protein.	0.676