STRINGSTRING
Cre-efa-6 Cre-efa-6 Cre-goa-1 Cre-goa-1 Cre-jnk-1 Cre-jnk-1 CRE_23824 CRE_23824 Cre-pxn-2 Cre-pxn-2 Cre-vhp-1 Cre-vhp-1 Cre-fsn-1 Cre-fsn-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-efa-6CRE-EFA-6 protein. (775 aa)
Cre-goa-1CRE-GOA-1 protein. (354 aa)
Cre-jnk-1Mitogen-activated protein kinase. (495 aa)
CRE_23824Mitogen-activated protein kinase. (463 aa)
Cre-pxn-2CRE-PXN-2 protein. (1360 aa)
Cre-vhp-1CRE-VHP-1 protein. (650 aa)
Cre-fsn-1CRE-FSN-1 protein. (346 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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