9 items (Caenorhabditis remanei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-rpt-4	CRE-RPT-4 protein; Belongs to the AAA ATPase family. (492 aa)
	CRE_28272	AAA domain-containing protein; Belongs to the AAA ATPase family. (409 aa)
	Cre-rpt-1	CRE-RPT-1 protein; Belongs to the AAA ATPase family. (435 aa)
	Cre-rpt-2	CRE-RPT-2 protein; Belongs to the AAA ATPase family. (443 aa)
	CRE_03184	AAA domain-containing protein; Belongs to the AAA ATPase family. (443 aa)
	CRE_02019	AAA domain-containing protein; Belongs to the AAA ATPase family. (438 aa)
	CRE_09394	AAA domain-containing protein; Belongs to the AAA ATPase family. (416 aa)
	Cre-rpt-5	CRE-RPT-5 protein; Belongs to the AAA ATPase family. (430 aa)
	Cre-rpt-6	CRE-RPT-6 protein; Belongs to the AAA ATPase family. (408 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_02019	CRE_03184	E3LGV3	E3LX06	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
CRE_02019	CRE_09394	E3LGV3	E3LIK9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
CRE_02019	CRE_28272	E3LGV3	E3LN27	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.983
CRE_02019	Cre-rpt-1	E3LGV3	E3LPW3	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-1 protein; Belongs to the AAA ATPase family.	0.998
CRE_02019	Cre-rpt-2	E3LGV3	E3LUK4	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-2 protein; Belongs to the AAA ATPase family.	0.952
CRE_02019	Cre-rpt-4	E3LGV3	E3N297	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-4 protein; Belongs to the AAA ATPase family.	0.981
CRE_02019	Cre-rpt-5	E3LGV3	E3LMJ8	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-5 protein; Belongs to the AAA ATPase family.	0.998
CRE_02019	Cre-rpt-6	E3LGV3	E3NCN2	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-6 protein; Belongs to the AAA ATPase family.	0.983
CRE_03184	CRE_02019	E3LX06	E3LGV3	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
CRE_03184	CRE_09394	E3LX06	E3LIK9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.921
CRE_03184	CRE_28272	E3LX06	E3LN27	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.979
CRE_03184	Cre-rpt-1	E3LX06	E3LPW3	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-1 protein; Belongs to the AAA ATPase family.	0.998
CRE_03184	Cre-rpt-2	E3LX06	E3LUK4	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-2 protein; Belongs to the AAA ATPase family.	0.998
CRE_03184	Cre-rpt-4	E3LX06	E3N297	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-4 protein; Belongs to the AAA ATPase family.	0.974
CRE_03184	Cre-rpt-5	E3LX06	E3LMJ8	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-5 protein; Belongs to the AAA ATPase family.	0.998
CRE_03184	Cre-rpt-6	E3LX06	E3NCN2	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-6 protein; Belongs to the AAA ATPase family.	0.980
CRE_09394	CRE_02019	E3LIK9	E3LGV3	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
CRE_09394	CRE_03184	E3LIK9	E3LX06	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.921
CRE_09394	CRE_28272	E3LIK9	E3LN27	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.979
CRE_09394	Cre-rpt-1	E3LIK9	E3LPW3	AAA domain-containing protein; Belongs to the AAA ATPase family.	CRE-RPT-1 protein; Belongs to the AAA ATPase family.	0.998