STRINGSTRING
Cre-dpy-27 Cre-dpy-27 Cre-mix-1 Cre-mix-1 Cre-smc-4 Cre-smc-4 Cre-smc-3 Cre-smc-3 Cre-him-1 Cre-him-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-dpy-27CRE-DPY-27 protein. (1568 aa)
Cre-mix-1CRE-MIX-1 protein. (691 aa)
Cre-smc-4CRE-SMC-4 protein. (1072 aa)
Cre-smc-3CRE-SMC-3 protein. (1232 aa)
Cre-him-1CRE-HIM-1 protein. (1203 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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