STRINGSTRING
Cre-vit-2 Cre-vit-2 CRE_00509 CRE_00509 CRE_00880 CRE_00880 CRE_00882 CRE_00882 CRE_00395 CRE_00395 CRE_00508 CRE_00508 Cre-vit-5 Cre-vit-5 Cre-vit-6 Cre-vit-6 CRE_00388 CRE_00388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-vit-2CRE-VIT-2 protein. (1620 aa)
CRE_00509Vitellogenin domain-containing protein. (763 aa)
CRE_00880DUF1943 domain-containing protein. (151 aa)
CRE_00882DUF1943 domain-containing protein. (409 aa)
CRE_00395Uncharacterized protein. (1596 aa)
CRE_00508VWFD domain-containing protein. (758 aa)
Cre-vit-5CRE-VIT-5 protein. (1599 aa)
Cre-vit-6CRE-VIT-6 protein. (1634 aa)
CRE_00388Uncharacterized protein. (1613 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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