STRINGSTRING
Cre-hda-3 Cre-hda-3 CRE_01852 CRE_01852 Cre-hda-2 Cre-hda-2 CRE_04702 CRE_04702 Cre-hda-6 Cre-hda-6 Cre-hda-4 Cre-hda-4 Cre-hda-1 Cre-hda-1 Cre-hdac-11 Cre-hdac-11 Cre-hdac-6 Cre-hdac-6 CRE_13458 CRE_13458 CRE_13460 CRE_13460 CRE_21947 CRE_21947
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cre-hda-3Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (483 aa)
CRE_01852Hist_deacetyl domain-containing protein. (508 aa)
Cre-hda-2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (504 aa)
CRE_04702Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (446 aa)
Cre-hda-6CRE-HDA-6 protein. (514 aa)
Cre-hda-4CRE-HDA-4 protein. (832 aa)
Cre-hda-1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (509 aa)
Cre-hdac-11CRE-HDAC-11 protein. (336 aa)
Cre-hdac-6CRE-HDAC-6 protein. (541 aa)
CRE_13458Hist_deacetyl domain-containing protein. (364 aa)
CRE_13460UBP-type domain-containing protein. (524 aa)
CRE_21947Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (459 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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