(53 nodes) Periplasmic binding protein-like I network (Caenorhabditis remanei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRE_13507	G_PROTEIN_RECEP_F3_4 domain-containing protein. (703 aa)
	CRE_04898	Guanylate cyclase. (843 aa)
	Cre-glr-4	CRE-GLR-4 protein. (956 aa)
	Cre-mgl-1	CRE-MGL-1 protein. (964 aa)
	Cre-gcy-8	Guanylate cyclase. (1159 aa)
	CRE_10228	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family. (759 aa)
	CRE_10320	Guanylate cyclase. (1134 aa)
	CRE_10188	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family. (1398 aa)
	CRE_10031	Guanylate cyclase. (1081 aa)
	Cre-gcy-11	Guanylate cyclase. (1067 aa)
	Cre-glr-1	CRE-GLR-1 protein. (965 aa)
	CRE_22408	Guanylate cyclase. (1085 aa)
	Cre-gcy-25	Guanylate cyclase. (1051 aa)
	CRE_03848	Uncharacterized protein. (299 aa)
	Cre-gcy-28	Guanylate cyclase. (1229 aa)
	Cre-mgl-2	CRE-MGL-2 protein; Belongs to the bZIP family. (1287 aa)
	CRE_04899	Guanylate cyclase. (1130 aa)
	CRE_30615	Guanylate cyclase. (1044 aa)
	CRE_16553	ANF_receptor domain-containing protein. (444 aa)
	CRE_26899	Peripla_BP_4 domain-containing protein. (146 aa)
	CRE_04442	Guanylate cyclase. (610 aa)
	Cre-gcy-18	Guanylate cyclase. (1124 aa)
	CRE_24890	G_PROTEIN_RECEP_F3_4 domain-containing protein. (1212 aa)
	CRE_10718	Uncharacterized protein. (106 aa)
	CRE_30223	Guanylate cyclase. (702 aa)
	CRE_26814	ANF_receptor domain-containing protein. (354 aa)
	CRE_24801	Guanylate cyclase. (1150 aa)
	Cre-gcy-5	Guanylate cyclase. (1236 aa)
	CRE_24798	Guanylate cyclase. (1135 aa)
	Cre-nmr-2	CRE-NMR-2 protein. (1113 aa)
	Cre-gcy-19	Guanylate cyclase. (1167 aa)
	CRE_13508	G_PROTEIN_RECEP_F3_4 domain-containing protein. (1006 aa)
	Cre-gcy-22	Guanylate cyclase. (1081 aa)
	Cre-gcy-17	Guanylate cyclase. (1283 aa)
	Cre-gcy-12	Guanylate cyclase. (1689 aa)
	Cre-nmr-1	CRE-NMR-1 protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1058 aa)
	CRE_09057	Guanylate cyclase. (1652 aa)
	Cre-glr-6	CRE-GLR-6 protein. (844 aa)
	CRE_09056	ANF_receptor domain-containing protein. (152 aa)
	Cre-glr-5	CRE-GLR-5 protein. (1023 aa)
	CRE_18603	Guanylate cyclase. (1556 aa)
	Cre-gcy-13	Guanylate cyclase. (856 aa)
	CRE_27406	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (599 aa)
	CRE_03849	ANF_receptor domain-containing protein. (285 aa)
	Cre-gcy-7	Guanylate cyclase. (1130 aa)
	Cre-gcy-21	Guanylate cyclase. (1190 aa)
	CRE_07528	G_PROTEIN_RECEP_F3_4 domain-containing protein. (961 aa)
	Cre-gcy-9	Guanylate cyclase. (1121 aa)
	Cre-daf-11	Guanylate cyclase. (1180 aa)
	Cre-gcy-29	Guanylate cyclase. (1093 aa)
	Cre-glr-2	CRE-GLR-2 protein. (976 aa)
	CRE_25127	G_PROTEIN_RECEP_F3_4 domain-containing protein. (1026 aa)
	CRE_30672	Guanylate cyclase. (1081 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_03849	Cre-gcy-21	E3LXG7	E3M1U2	ANF_receptor domain-containing protein.	Guanylate cyclase.	0.407
CRE_04898	Cre-gcy-21	E3MN79	E3M1U2	Guanylate cyclase.	Guanylate cyclase.	0.480
CRE_04899	Cre-gcy-21	E3MN80	E3M1U2	Guanylate cyclase.	Guanylate cyclase.	0.502
CRE_07528	CRE_10188	E3M293	E3M6T2	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	0.769
CRE_07528	CRE_10228	E3M293	E3M605	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	0.946
CRE_07528	CRE_10718	E3M293	E3NMT6	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.780
CRE_07528	CRE_13507	E3M293	E3MR09	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.780
CRE_07528	CRE_13508	E3M293	E3MR13	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.780
CRE_07528	CRE_24890	E3M293	E3NR36	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.769
CRE_07528	Cre-mgl-1	E3M293	E3MMQ8	G_PROTEIN_RECEP_F3_4 domain-containing protein.	CRE-MGL-1 protein.	0.780
CRE_07528	Cre-mgl-2	E3M293	E3LW39	G_PROTEIN_RECEP_F3_4 domain-containing protein.	CRE-MGL-2 protein; Belongs to the bZIP family.	0.780
CRE_09056	Cre-gcy-21	E3LJ42	E3M1U2	ANF_receptor domain-containing protein.	Guanylate cyclase.	0.407
CRE_09057	Cre-gcy-21	E3LJ43	E3M1U2	Guanylate cyclase.	Guanylate cyclase.	0.508
CRE_10031	Cre-gcy-11	E3M6W7	E3MB44	Guanylate cyclase.	Guanylate cyclase.	0.475
CRE_10031	Cre-gcy-12	E3M6W7	E3M4I8	Guanylate cyclase.	Guanylate cyclase.	0.535
CRE_10188	CRE_07528	E3M6T2	E3M293	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.769
CRE_10188	CRE_10228	E3M6T2	E3M605	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	0.769
CRE_10228	CRE_07528	E3M605	E3M293	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.946
CRE_10228	CRE_10188	E3M605	E3M6T2	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	0.769
CRE_10228	CRE_10718	E3M605	E3NMT6	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	Uncharacterized protein.	0.780