STRINGSTRING
CRE_26445 CRE_26445 Cre-cpb-2 Cre-cpb-2 Cre-rsp-5 Cre-rsp-5 CRE_26315 CRE_26315 CRE_26346 CRE_26346 Cre-cpb-1 Cre-cpb-1 Cre-rnp-7 Cre-rnp-7 CRE_31171 CRE_31171 Cre-nxf-1 Cre-nxf-1 Cre-mec-8 Cre-mec-8 Cre-fox-1 Cre-fox-1 Cre-rcn-1 Cre-rcn-1 CRE_04727 CRE_04727 Cre-psf-1 Cre-psf-1 Cre-drr-2 Cre-drr-2 Cre-cpb-3 Cre-cpb-3 Cre-hrpf-1 Cre-hrpf-1 CRE_03683 CRE_03683 Cre-nrd-1 Cre-nrd-1 Cre-rnp-8 Cre-rnp-8 CRE_30980 CRE_30980 CRE_29659 CRE_29659 Cre-sig-7 Cre-sig-7 Cre-pab-1 Cre-pab-1 CRE_29855 CRE_29855 CRE_02981 CRE_02981 CRE_03012 CRE_03012 CRE_15110 CRE_15110 CRE_04409 CRE_04409 CRE_01432 CRE_01432 CRE_01435 CRE_01435 Cre-etr-1 Cre-etr-1 Cre-rnp-2 Cre-rnp-2 Cre-rnp-3 Cre-rnp-3 CRE_22708 CRE_22708 CRE_30214 CRE_30214 CRE_30228 CRE_30228 CRE_30227 CRE_30227 CRE_24262 CRE_24262 CRE_24261 CRE_24261 CRE_20046 CRE_20046 CRE_20061 CRE_20061 CRE_24247 CRE_24247 CRE_22109 CRE_22109 CRE_03446 CRE_03446 CRE_23729 CRE_23729 CRE_23716 CRE_23716 CRE_16392 CRE_16392 Cre-exc-7 Cre-exc-7 Cre-twk-4 Cre-twk-4 Cre-unc-75 Cre-unc-75 Cre-hrp-1 Cre-hrp-1 CRE_24177 CRE_24177 CRE_22657 CRE_22657 CRE_16299 CRE_16299 CRE_13671 CRE_13671 CRE_13667 CRE_13667 Cre-asd-1 Cre-asd-1 CRE_25790 CRE_25790 CRE_19381 CRE_19381 CRE_19891 CRE_19891 Cre-tag-262 Cre-tag-262 CRE_26714 CRE_26714 CRE_26746 CRE_26746 CRE_01187 CRE_01187 CRE_24556 CRE_24556 Cre-ncbp-2 Cre-ncbp-2 CRE_15496 CRE_15496 CRE_15490 CRE_15490 Cre-uaf-1 Cre-uaf-1 CRE_30220 CRE_30220 Cre-sqd-1 Cre-sqd-1 Cre-hrpf-2 Cre-hrpf-2 CRE_14155 CRE_14155 CRE_14154 CRE_14154 CRE_14125 CRE_14125 CRE_14072 CRE_14072 CRE_14071 CRE_14071 CRE_13540 CRE_13540 CRE_13466 CRE_13466 CRE_13511 CRE_13511 CRE_12048 CRE_12048 CRE_12119 CRE_12119 CRE_08342 CRE_08342 CRE_03259 CRE_03259 CRE_29991 CRE_29991 CRE_25750 CRE_25750 CRE_25670 CRE_25670 fog-1 fog-1 CRE_20669 CRE_20669 CRE_13229 CRE_13229 CRE_15246 CRE_15246 CRE_07179 CRE_07179 CRE_15843 CRE_15843 CRE_15842 CRE_15842 CRE_15841 CRE_15841 CRE_21085 CRE_21085 CRE_21084 CRE_21084 CRE_21083 CRE_21083 CRE_22247 CRE_22247 CRE_26010 CRE_26010 CRE_25996 CRE_25996 CRE_10745 CRE_10745 CRE_10744 CRE_10744 CRE_10743 CRE_10743 CRE_04437 CRE_04437 CRE_14401 CRE_14401 CRE_30576 CRE_30576 CRE_15184 CRE_15184 CRE_18318 CRE_18318 CRE_07908 CRE_07908 CRE_25703 CRE_25703 CRE_25702 CRE_25702 CRE_25636 CRE_25636 CRE_25625 CRE_25625 Cre-tag-310 Cre-tag-310 CRE_27700 CRE_27700 Cre-cyn-13 Cre-cyn-13 Cre-uaf-2 Cre-uaf-2 CRE_00967 CRE_00967 Cre-rsp-8 Cre-rsp-8 CRE_22805 CRE_22805 Cre-acin-1 Cre-acin-1 CRE_23966 CRE_23966 CRE_24036 CRE_24036 CRE_20758 CRE_20758 Cre-pab-2 Cre-pab-2 Cre-rnp-4 Cre-rnp-4 CRE_20239 CRE_20239 CRE_20218 CRE_20218 Cre-set-2 Cre-set-2 CRE_16080 CRE_16080 Cre-cpf-2 Cre-cpf-2 CRE_30217 CRE_30217 CRE_30216 CRE_30216 CRE_30215 CRE_30215 CRE_30229 CRE_30229 Cre-rsp-3 Cre-rsp-3 Cre-msi-1 Cre-msi-1 CRE_12801 CRE_12801 CRE_12786 CRE_12786 CRE_10212 CRE_10212 CRE_10187 CRE_10187 Cre-rbd-1 Cre-rbd-1 CRE_11038 CRE_11038 CRE_10826 CRE_10826 CRE_10821 CRE_10821 Cre-ntl-4 Cre-ntl-4 CRE_11982 CRE_11982 CRE_11960 CRE_11960 Cre-daz-1 Cre-daz-1 CRE_11774 CRE_11774 Cre-mel-47 Cre-mel-47 CRE_11941 CRE_11941 Cre-rsp-4 Cre-rsp-4 Cre-pabp-2 Cre-pabp-2 CRE_00749 CRE_00749 Cre-sup-12 Cre-sup-12 Cre-din-1 Cre-din-1 Cre-rsp-1 Cre-rsp-1 Cre-rsp-2 Cre-rsp-2 Cre-npp-19 Cre-npp-19 Cre-ptb-1 Cre-ptb-1 CRE_02201 CRE_02201 Cre-rsp-7 Cre-rsp-7 Cre-tdp-1 Cre-tdp-1 Cre-eif-3.G Cre-eif-3.G Cre-sap-49 Cre-sap-49 CRE_18824 CRE_18824 Cre-rnp-6 Cre-rnp-6 Cre-ztf-4 Cre-ztf-4 Cre-exo-3 Cre-exo-3 CRE_28621 CRE_28621 CRE_28335 CRE_28335 CRE_28336 CRE_28336 Cre-hrp-2 Cre-hrp-2 CRE_27124 CRE_27124 CRE_27271 CRE_27271 Cre-rnp-1 Cre-rnp-1 CRE_27078 CRE_27078 CRE_26483 CRE_26483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRE_26445Uncharacterized protein. (557 aa)
Cre-cpb-2CRE-CPB-2 protein. (571 aa)
Cre-rsp-5CRE-RSP-5 protein. (215 aa)
CRE_26315RRM domain-containing protein. (302 aa)
CRE_26346Uncharacterized protein. (606 aa)
Cre-cpb-1CRE-CPB-1 protein. (610 aa)
Cre-rnp-7CRE-RNP-7 protein. (326 aa)
CRE_31171RRM domain-containing protein. (362 aa)
Cre-nxf-1CRE-NXF-1 protein. (620 aa)
Cre-mec-8CRE-MEC-8 protein. (305 aa)
Cre-fox-1CRE-FOX-1 protein. (420 aa)
Cre-rcn-1CRE-RCN-1 protein. (209 aa)
CRE_04727C3H1-type domain-containing protein. (742 aa)
Cre-psf-1CRE-PSF-1 protein. (538 aa)
Cre-drr-2CRE-DRR-2 protein. (223 aa)
Cre-cpb-3CRE-CPB-3 protein. (766 aa)
Cre-hrpf-1CRE-HRPF-1 protein. (558 aa)
CRE_03683Uncharacterized protein. (401 aa)
Cre-nrd-1CRE-NRD-1 protein. (900 aa)
Cre-rnp-8CRE-RNP-8 protein. (684 aa)
CRE_30980Uncharacterized protein. (456 aa)
CRE_29659Uncharacterized protein. (860 aa)
Cre-sig-7Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (452 aa)
Cre-pab-1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (695 aa)
CRE_29855Uncharacterized protein. (669 aa)
CRE_02981Uncharacterized protein. (317 aa)
CRE_03012RRM domain-containing protein. (304 aa)
CRE_15110Uncharacterized protein. (329 aa)
CRE_04409FoP_duplication domain-containing protein. (235 aa)
CRE_01432RRM domain-containing protein. (183 aa)
CRE_01435RRM domain-containing protein. (197 aa)
Cre-etr-1CRE-ETR-1 protein. (612 aa)
Cre-rnp-2CRE-RNP-2 protein. (206 aa)
Cre-rnp-3CRE-RNP-3 protein. (223 aa)
CRE_22708BTB domain-containing protein. (356 aa)
CRE_30214RRM domain-containing protein. (186 aa)
CRE_30228Uncharacterized protein. (90 aa)
CRE_30227Uncharacterized protein. (87 aa)
CRE_24262RRM domain-containing protein. (116 aa)
CRE_24261RRM domain-containing protein. (112 aa)
CRE_20046Uncharacterized protein. (333 aa)
CRE_20061Uncharacterized protein. (336 aa)
CRE_24247Uncharacterized protein. (869 aa)
CRE_22109RRM domain-containing protein. (138 aa)
CRE_03446RRM domain-containing protein. (784 aa)
CRE_23729Uncharacterized protein. (263 aa)
CRE_23716Uncharacterized protein. (602 aa)
CRE_16392RRM domain-containing protein. (687 aa)
Cre-exc-7CRE-EXC-7 protein. (457 aa)
Cre-twk-4CRE-TWK-4 protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (1026 aa)
Cre-unc-75CRE-UNC-75 protein. (491 aa)
Cre-hrp-1CRE-HRP-1 protein. (344 aa)
CRE_24177Uncharacterized protein. (284 aa)
CRE_22657RRM domain-containing protein. (357 aa)
CRE_16299Uncharacterized protein. (329 aa)
CRE_13671Uncharacterized protein. (328 aa)
CRE_13667RRM domain-containing protein. (160 aa)
Cre-asd-1CRE-ASD-1 protein. (449 aa)
CRE_25790RRM domain-containing protein. (497 aa)
CRE_19381Uncharacterized protein. (491 aa)
CRE_19891BTB domain-containing protein. (352 aa)
Cre-tag-262CRE-TAG-262 protein. (296 aa)
CRE_26714RRM domain-containing protein. (294 aa)
CRE_26746Uncharacterized protein. (651 aa)
CRE_01187Uncharacterized protein. (922 aa)
CRE_24556Uncharacterized protein. (408 aa)
Cre-ncbp-2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. (189 aa)
CRE_15496Uncharacterized protein. (318 aa)
CRE_15490Uncharacterized protein. (393 aa)
Cre-uaf-1U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (496 aa)
CRE_30220RRM domain-containing protein. (188 aa)
Cre-sqd-1CRE-SQD-1 protein. (334 aa)
Cre-hrpf-2CRE-HRPF-2 protein. (621 aa)
CRE_14155Uncharacterized protein. (179 aa)
CRE_14154Uncharacterized protein. (187 aa)
CRE_14125FoP_duplication domain-containing protein. (229 aa)
CRE_14072Uncharacterized protein. (181 aa)
CRE_14071FoP_duplication domain-containing protein. (235 aa)
CRE_13540RRM domain-containing protein. (979 aa)
CRE_13466RRM domain-containing protein. (214 aa)
CRE_13511RRM domain-containing protein. (201 aa)
CRE_12048RRM domain-containing protein. (172 aa)
CRE_12119RRM domain-containing protein. (169 aa)
CRE_08342RRM domain-containing protein. (426 aa)
CRE_03259Uncharacterized protein. (358 aa)
CRE_29991Uncharacterized protein. (491 aa)
CRE_25750RRM domain-containing protein. (303 aa)
CRE_25670RRM domain-containing protein. (302 aa)
fog-1CRE-FOG-1 protein. (597 aa)
CRE_20669FoP_duplication domain-containing protein. (235 aa)
CRE_13229RRM domain-containing protein. (194 aa)
CRE_15246Uncharacterized protein. (275 aa)
CRE_07179Uncharacterized protein. (174 aa)
CRE_15843Uncharacterized protein. (187 aa)
CRE_15842Uncharacterized protein. (174 aa)
CRE_15841FoP_duplication domain-containing protein. (235 aa)
CRE_21085FoP_duplication domain-containing protein. (235 aa)
CRE_21084Uncharacterized protein. (172 aa)
CRE_21083Uncharacterized protein. (187 aa)
CRE_22247Uncharacterized protein. (901 aa)
CRE_26010NTF2 domain-containing protein. (526 aa)
CRE_25996RRM domain-containing protein. (116 aa)
CRE_10745Uncharacterized protein. (181 aa)
CRE_10744Uncharacterized protein. (222 aa)
CRE_10743Uncharacterized protein. (140 aa)
CRE_04437RRM domain-containing protein. (511 aa)
CRE_14401Uncharacterized protein. (264 aa)
CRE_30576NTF2 domain-containing protein. (409 aa)
CRE_15184FoP_duplication domain-containing protein. (291 aa)
CRE_18318Uncharacterized protein. (491 aa)
CRE_07908RRM domain-containing protein. (798 aa)
CRE_25703RRM domain-containing protein. (138 aa)
CRE_25702RRM domain-containing protein. (177 aa)
CRE_25636Uncharacterized protein. (1775 aa)
CRE_25625RRM domain-containing protein. (386 aa)
Cre-tag-310CRE-TAG-310 protein. (528 aa)
CRE_27700RRM domain-containing protein. (201 aa)
Cre-cyn-13CRE-CYN-13 protein. (337 aa)
Cre-uaf-2CRE-UAF-2 protein. (287 aa)
CRE_00967RRM domain-containing protein. (329 aa)
Cre-rsp-8CRE-RSP-8 protein. (297 aa)
CRE_22805Smg4_UPF3 domain-containing protein. (514 aa)
Cre-acin-1CRE-ACIN-1 protein. (604 aa)
CRE_23966Uncharacterized protein. (451 aa)
CRE_24036Uncharacterized protein. (974 aa)
CRE_20758Uncharacterized protein. (450 aa)
Cre-pab-2Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (730 aa)
Cre-rnp-4RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (142 aa)
CRE_20239RRM domain-containing protein. (334 aa)
CRE_20218Uncharacterized protein. (329 aa)
Cre-set-2CRE-SET-2 protein. (1505 aa)
CRE_16080Uncharacterized protein. (155 aa)
Cre-cpf-2CRE-CPF-2 protein. (345 aa)
CRE_30217RRM domain-containing protein. (205 aa)
CRE_30216RRM domain-containing protein. (185 aa)
CRE_30215RRM domain-containing protein. (182 aa)
CRE_30229RRM domain-containing protein. (183 aa)
Cre-rsp-3CRE-RSP-3 protein. (262 aa)
Cre-msi-1CRE-MSI-1 protein. (335 aa)
CRE_12801Uncharacterized protein. (369 aa)
CRE_12786Uncharacterized protein. (862 aa)
CRE_10212Uncharacterized protein. (521 aa)
CRE_10187RRM domain-containing protein. (848 aa)
Cre-rbd-1CRE-RBD-1 protein. (888 aa)
CRE_11038Uncharacterized protein. (406 aa)
CRE_10826RRM domain-containing protein. (277 aa)
CRE_10821RRM domain-containing protein. (155 aa)
Cre-ntl-4CRE-NTL-4 protein. (832 aa)
CRE_11982Uncharacterized protein. (404 aa)
CRE_11960Uncharacterized protein. (414 aa)
Cre-daz-1CRE-DAZ-1 protein. (466 aa)
CRE_11774Uncharacterized protein. (414 aa)
Cre-mel-47CRE-MEL-47 protein. (380 aa)
CRE_11941Uncharacterized protein. (752 aa)
Cre-rsp-4CRE-RSP-4 protein. (199 aa)
Cre-pabp-2CRE-PABP-2 protein. (205 aa)
CRE_00749Uncharacterized protein. (336 aa)
Cre-sup-12CRE-SUP-12 protein. (246 aa)
Cre-din-1CRE-DIN-1 protein. (2318 aa)
Cre-rsp-1CRE-RSP-1 protein. (308 aa)
Cre-rsp-2CRE-RSP-2 protein. (281 aa)
Cre-npp-19CRE-NPP-19 protein. (375 aa)
Cre-ptb-1CRE-PTB-1 protein. (436 aa)
CRE_02201RRM domain-containing protein. (273 aa)
Cre-rsp-7CRE-RSP-7 protein. (466 aa)
Cre-tdp-1CRE-TDP-1 protein. (409 aa)
Cre-eif-3.GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (260 aa)
Cre-sap-49CRE-SAP-49 protein. (389 aa)
CRE_18824RRM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (636 aa)
Cre-rnp-6CRE-RNP-6 protein. (817 aa)
Cre-ztf-4CRE-ZTF-4 protein. (366 aa)
Cre-exo-3DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (334 aa)
CRE_28621RRM domain-containing protein. (85 aa)
CRE_28335RRM domain-containing protein. (150 aa)
CRE_28336RRM domain-containing protein. (84 aa)
Cre-hrp-2CRE-HRP-2 protein. (645 aa)
CRE_27124Uncharacterized protein. (706 aa)
CRE_27271RRM domain-containing protein. (114 aa)
Cre-rnp-1CRE-RNP-1 protein. (304 aa)
CRE_27078RRM domain-containing protein. (371 aa)
CRE_26483RRM domain-containing protein. (602 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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