STRINGSTRING
CRE_18396 CRE_18396 Cre-npax-2 Cre-npax-2 Cre-ets-4 Cre-ets-4 Cre-ets-5 Cre-ets-5 CRE_00829 CRE_00829 Cre-fkh-9 Cre-fkh-9 Cre-fkh-2 Cre-fkh-2 CRE_01733 CRE_01733 Cre-unc-130 Cre-unc-130 Cre-pqn-47 Cre-pqn-47 CRE_01589 CRE_01589 Cre-mig-5 Cre-mig-5 Cre-efl-1 Cre-efl-1 Cre-cul-3 Cre-cul-3 Cre-mys-2 Cre-mys-2 Cre-larp-5 Cre-larp-5 Cre-vps-25 Cre-vps-25 CRE_28445 CRE_28445 Cre-daf-16 Cre-daf-16 CRE_28481 CRE_28481 Cre-hsf-1 Cre-hsf-1 Cre-egl-10 Cre-egl-10 Cre-mys-1 Cre-mys-1 Cre-npax-1 Cre-npax-1 Cre-cul-4 Cre-cul-4 Cre-wrn-1 Cre-wrn-1 Cre-toe-2 Cre-toe-2 Cre-fkh-8 Cre-fkh-8 CRE_26060 CRE_26060 Cre-epac-1 Cre-epac-1 Cre-let-99 Cre-let-99 Cre-larp-1 Cre-larp-1 CRE_30695 CRE_30695 Cre-cul-5 Cre-cul-5 Cre-eif-3.K Cre-eif-3.K eif-3.K eif-3.K CRE_30726 CRE_30726 CRE_30747 CRE_30747 Cre-let-381 Cre-let-381 CRE_29652 CRE_29652 CRE_02881 CRE_02881 Cre-rps-10 Cre-rps-10 CRE_03668 CRE_03668 CRE_03683 CRE_03683 Cre-mys-4 Cre-mys-4 Cre-cul-2 Cre-cul-2 CRE_04768 CRE_04768 CRE_04772 CRE_04772 Cre-cul-1 Cre-cul-1 Cre-pax-1 Cre-pax-1 CRE_05781 CRE_05781 CRE_06679 CRE_06679 Cre-vab-3 Cre-vab-3 Cre-rps-19 Cre-rps-19 Cre-eat-16 Cre-eat-16 Cre-dsh-2 Cre-dsh-2 Cre-dsh-1 Cre-dsh-1 Cre-npax-3 Cre-npax-3 CRE_10261 CRE_10261 Cre-agt-1 Cre-agt-1 CRE_10205 CRE_10205 Cre-spo-11 Cre-spo-11 Cre-prx-14 Cre-prx-14 Cre-spr-5 Cre-spr-5 CRE_16703 CRE_16703 Cre-his-24 Cre-his-24 Cre-tag-97 Cre-tag-97 CRE_20287 CRE_20287 Cre-vps-22 Cre-vps-22 CRE_20313 CRE_20313 CRE_21835 CRE_21835 Cre-psa-1 Cre-psa-1 CRE_21236 CRE_21236 CRE_21244 CRE_21244 CRE_21246 CRE_21246 Cre-apc-2 Cre-apc-2 Cre-fkh-10 Cre-fkh-10 CRE_23445 CRE_23445 CRE_23449 CRE_23449 CRE_23462 CRE_23462 CRE_22873 CRE_22873 Cre-lsy-12 Cre-lsy-12 Cre-fkh-6 Cre-fkh-6 CRE_13894 CRE_13894 CRE_00954 CRE_00954 CRE_02394 CRE_02394 CRE_09589 CRE_09589 CRE_19179 CRE_19179 CRE_25660 CRE_25660 CRE_25739 CRE_25739 CRE_31308 CRE_31308 CRE_31245 CRE_31245 CRE_31246 CRE_31246 CRE_03188 CRE_03188 Cre-efl-2 Cre-efl-2 Cre-hil-1 Cre-hil-1 CRE_12079 CRE_12079 Cre-fkh-7 Cre-fkh-7 CRE_16178 CRE_16178 Cre-tag-318 Cre-tag-318 CRE_22485 CRE_22485 CRE_22547 CRE_22547 Cre-ast-1 Cre-ast-1 CRE_21370 CRE_21370 CRE_24595 CRE_24595 Cre-rpn-5 Cre-rpn-5 CRE_26713 CRE_26713 CRE_26759 CRE_26759 Cre-csn-4 Cre-csn-4 CRE_03331 CRE_03331 CRE_03332 CRE_03332 CRE_03352 CRE_03352 Cre-lsd-1 Cre-lsd-1 Cre-eyg-1 Cre-eyg-1 CRE_08474 CRE_08474 CRE_11367 CRE_11367 Cre-riok-2 Cre-riok-2 CRE_16276 CRE_16276 Cre-lin-31 Cre-lin-31 Cre-dpl-1 Cre-dpl-1 CRE_09716 CRE_09716 Cre-map-2 Cre-map-2 CRE_08477 CRE_08477 Cre-rpa-2 Cre-rpa-2 CRE_19968 CRE_19968 CRE_18187 CRE_18187 CRE_18169 CRE_18169 Cre-pes-1 Cre-pes-1 Cre-him-6 Cre-him-6 CRE_26770 CRE_26770 Cre-daf-19 Cre-daf-19 Cre-pax-3 Cre-pax-3 CRE_10647 CRE_10647 Cre-amx-1 Cre-amx-1 CRE_24249 CRE_24249 CRE_11501 CRE_11501 CRE_22124 CRE_22124 CRE_27903 CRE_27903 CRE_24833 CRE_24833 CRE_01407 CRE_01407 Cre-egl-38 Cre-egl-38 Cre-lin-1 Cre-lin-1 CRE_24876 CRE_24876 CRE_07125 CRE_07125 CRE_07126 CRE_07126 CRE_23242 CRE_23242 CRE_17749 CRE_17749 CRE_05334 CRE_05334 CRE_12434 CRE_12434 CRE_18359 CRE_18359 CRE_15236 CRE_15236 CRE_09945 CRE_09945 CRE_15855 CRE_15855 CRE_01513 CRE_01513 CRE_23286 CRE_23286 CRE_07193 CRE_07193 CRE_15860 CRE_15860 CRE_13875 CRE_13875 CRE_13877 CRE_13877 CRE_10797 CRE_10797 CRE_08632 CRE_08632 CRE_01523 CRE_01523 CRE_22769 CRE_22769 CRE_13887 CRE_13887 CRE_22770 CRE_22770 CRE_03606 CRE_03606
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRE_18396HrcA domain-containing protein. (410 aa)
Cre-npax-2CRE-NPAX-2 protein. (233 aa)
Cre-ets-4CRE-ETS-4 protein. (463 aa)
Cre-ets-5CRE-ETS-5 protein. (323 aa)
CRE_00829ETS domain-containing protein. (307 aa)
Cre-fkh-9CRE-FKH-9 protein. (280 aa)
Cre-fkh-2CRE-FKH-2 protein. (278 aa)
CRE_01733Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
Cre-unc-130CRE-UNC-130 protein. (335 aa)
Cre-pqn-47CRE-PQN-47 protein. (932 aa)
CRE_01589Uncharacterized protein. (590 aa)
Cre-mig-5CRE-MIG-5 protein. (680 aa)
Cre-efl-1CRE-EFL-1 protein. (359 aa)
Cre-cul-3CRE-CUL-3 protein; Belongs to the cullin family. (780 aa)
Cre-mys-2Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (522 aa)
Cre-larp-5CRE-LARP-5 protein. (705 aa)
Cre-vps-25CRE-VPS-25 protein. (179 aa)
CRE_28445Phorbol-ester/DAG-type domain-containing protein. (410 aa)
Cre-daf-16CRE-DAF-16 protein. (528 aa)
CRE_28481Fork-head domain-containing protein. (192 aa)
Cre-hsf-1CRE-HSF-1 protein. (702 aa)
Cre-egl-10CRE-EGL-10 protein. (570 aa)
Cre-mys-1Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (478 aa)
Cre-npax-1CRE-NPAX-1 protein. (117 aa)
Cre-cul-4CRE-CUL-4 protein; Belongs to the cullin family. (841 aa)
Cre-wrn-1CRE-WRN-1 protein. (1081 aa)
Cre-toe-2CRE-TOE-2 protein. (639 aa)
Cre-fkh-8CRE-FKH-8 protein. (362 aa)
CRE_26060Lactamase_B domain-containing protein. (326 aa)
Cre-epac-1CRE-EPAC-1 protein. (1047 aa)
Cre-let-99CRE-LET-99 protein. (716 aa)
Cre-larp-1CRE-LARP-1 protein. (1163 aa)
CRE_30695Paired domain-containing protein. (285 aa)
Cre-cul-5CRE-CUL-5 protein; Belongs to the cullin family. (762 aa)
Cre-eif-3.KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (256 aa)
eif-3.KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (738 aa)
CRE_30726PCI domain-containing protein. (219 aa)
CRE_30747Fork-head domain-containing protein. (395 aa)
Cre-let-381CRE-LET-381 protein. (369 aa)
CRE_29652RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (543 aa)
CRE_02881Uncharacterized protein. (329 aa)
Cre-rps-10CRE-RPS-10 protein. (151 aa)
CRE_03668DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (296 aa)
CRE_03683Uncharacterized protein. (401 aa)
Cre-mys-4Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (622 aa)
Cre-cul-2CRE-CUL-2 protein; Belongs to the cullin family. (815 aa)
CRE_04768H15 domain-containing protein. (227 aa)
CRE_04772H15 domain-containing protein. (197 aa)
Cre-cul-1CRE-CUL-1 protein; Belongs to the cullin family. (798 aa)
Cre-pax-1CRE-PAX-1 protein. (244 aa)
CRE_05781ETS domain-containing protein. (207 aa)
CRE_06679Uncharacterized protein. (346 aa)
Cre-vab-3CRE-VAB-3 protein. (462 aa)
Cre-rps-19CRE-RPS-19 protein. (146 aa)
Cre-eat-16CRE-EAT-16 protein. (477 aa)
Cre-dsh-2CRE-DSH-2 protein. (718 aa)
Cre-dsh-1CRE-DSH-1 protein. (934 aa)
Cre-npax-3CRE-NPAX-3 protein. (218 aa)
CRE_10261Uncharacterized protein. (632 aa)
Cre-agt-1CRE-AGT-1 protein. (175 aa)
CRE_10205Peptidase_M24 domain-containing protein. (392 aa)
Cre-spo-11CRE-SPO-11 protein. (448 aa)
Cre-prx-14CRE-PRX-14 protein. (258 aa)
Cre-spr-5Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (746 aa)
CRE_16703Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (431 aa)
Cre-his-24CRE-HIS-24 protein. (203 aa)
Cre-tag-97CRE-TAG-97 protein. (503 aa)
CRE_20287PCI domain-containing protein. (413 aa)
Cre-vps-22Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (269 aa)
CRE_20313Uncharacterized protein. (216 aa)
CRE_21835Fork-head domain-containing protein. (594 aa)
Cre-psa-1CRE-PSA-1 protein. (819 aa)
CRE_21236Uncharacterized protein. (229 aa)
CRE_21244Fork-head domain-containing protein. (408 aa)
CRE_21246Fork-head domain-containing protein. (499 aa)
Cre-apc-2CRE-APC-2 protein; Belongs to the cullin family. (732 aa)
Cre-fkh-10CRE-FKH-10 protein. (207 aa)
CRE_23445Fork-head domain-containing protein. (238 aa)
CRE_23449Fork-head domain-containing protein. (103 aa)
CRE_23462Uncharacterized protein. (329 aa)
CRE_22873MYST-type HAT domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (1068 aa)
Cre-lsy-12Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1212 aa)
Cre-fkh-6CRE-FKH-6 protein. (368 aa)
CRE_13894HTH gntR-type domain-containing protein. (231 aa)
CRE_00954Uncharacterized protein. (338 aa)
CRE_02394Peptidase_M28 domain-containing protein. (451 aa)
CRE_09589Uncharacterized protein. (325 aa)
CRE_19179H15 domain-containing protein. (260 aa)
CRE_25660ETS domain-containing protein. (399 aa)
CRE_25739ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (630 aa)
CRE_31308Fork-head domain-containing protein. (457 aa)
CRE_31245Fork-head domain-containing protein. (373 aa)
CRE_31246Fork-head domain-containing protein. (435 aa)
CRE_03188Peptidase S74 domain-containing protein. (567 aa)
Cre-efl-2CRE-EFL-2 protein. (337 aa)
Cre-hil-1CRE-HIL-1 protein. (234 aa)
CRE_12079CULLIN_2 domain-containing protein; Belongs to the cullin family. (783 aa)
Cre-fkh-7CRE-FKH-7 protein. (929 aa)
CRE_16178ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (607 aa)
Cre-tag-318CRE-TAG-318 protein. (383 aa)
CRE_22485Uncharacterized protein. (1870 aa)
CRE_22547Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (484 aa)
Cre-ast-1CRE-AST-1 protein. (381 aa)
CRE_21370CULLIN_2 domain-containing protein; Belongs to the cullin family. (751 aa)
CRE_24595Uncharacterized protein. (2148 aa)
Cre-rpn-5CRE-RPN-5 protein. (507 aa)
CRE_26713ETS domain-containing protein. (483 aa)
CRE_26759ETS domain-containing protein. (136 aa)
Cre-csn-4CRE-CSN-4 protein. (413 aa)
CRE_03331Uncharacterized protein. (1679 aa)
CRE_03332Paired domain-containing protein. (215 aa)
CRE_03352Paired domain-containing protein. (226 aa)
Cre-lsd-1CRE-LSD-1 protein. (729 aa)
Cre-eyg-1CRE-EYG-1 protein. (315 aa)
CRE_08474Fork-head domain-containing protein. (361 aa)
CRE_11367General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
Cre-riok-2CRE-RIOK-2 protein. (538 aa)
CRE_16276HTH_48 domain-containing protein. (342 aa)
Cre-lin-31CRE-LIN-31 protein. (228 aa)
Cre-dpl-1CRE-DPL-1 protein. (613 aa)
CRE_09716Uncharacterized protein. (487 aa)
Cre-map-2Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (441 aa)
CRE_08477Fork-head domain-containing protein. (735 aa)
Cre-rpa-2CRE-RPA-2 protein. (289 aa)
CRE_19968Uncharacterized protein. (329 aa)
CRE_18187Fork-head domain-containing protein. (554 aa)
CRE_18169Fork-head domain-containing protein. (572 aa)
Cre-pes-1CRE-PES-1 protein. (245 aa)
Cre-him-6CRE-HIM-6 protein. (1039 aa)
CRE_26770H15 domain-containing protein. (214 aa)
Cre-daf-19CRE-DAF-19 protein. (665 aa)
Cre-pax-3CRE-PAX-3 protein. (333 aa)
CRE_10647PCI domain-containing protein. (413 aa)
Cre-amx-1CRE-AMX-1 protein. (617 aa)
CRE_24249Fork-head domain-containing protein. (378 aa)
CRE_11501H15 domain-containing protein. (214 aa)
CRE_22124HTH_48 domain-containing protein. (341 aa)
CRE_27903H15 domain-containing protein. (215 aa)
CRE_24833Uncharacterized protein. (329 aa)
CRE_01407Uncharacterized protein. (342 aa)
Cre-egl-38CRE-EGL-38 protein. (293 aa)
Cre-lin-1CRE-LIN-1 protein. (481 aa)
CRE_24876HTH_48 domain-containing protein. (341 aa)
CRE_07125HTH luxR-type domain-containing protein. (831 aa)
CRE_07126H15 domain-containing protein. (251 aa)
CRE_23242TP6A_N domain-containing protein. (458 aa)
CRE_17749Uncharacterized protein. (1020 aa)
CRE_05334Fork-head domain-containing protein. (246 aa)
CRE_12434HTH_Tnp_Tc3_1 domain-containing protein. (191 aa)
CRE_18359Uncharacterized protein. (262 aa)
CRE_15236HTH lysR-type domain-containing protein. (331 aa)
CRE_09945Uncharacterized protein. (166 aa)
CRE_15855Uncharacterized protein. (204 aa)
CRE_01513Uncharacterized protein. (329 aa)
CRE_23286HTH lysR-type domain-containing protein. (316 aa)
CRE_07193Uncharacterized protein. (199 aa)
CRE_15860HTH lysR-type domain-containing protein. (296 aa)
CRE_13875HTH asnC-type domain-containing protein. (606 aa)
CRE_13877HTH lysR-type domain-containing protein. (304 aa)
CRE_10797Uncharacterized protein. (160 aa)
CRE_08632HTH_Tnp_IS630 domain-containing protein. (170 aa)
CRE_01523HTH gntR-type domain-containing protein. (169 aa)
CRE_22769HTH hxlR-type domain-containing protein. (117 aa)
CRE_13887HTH lysR-type domain-containing protein. (298 aa)
CRE_22770HTH arsR-type domain-containing protein. (107 aa)
CRE_03606EngB-type G domain-containing protein. (271 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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