STRINGSTRING
CRE_05338 CRE_05338 Cre-eps-8 Cre-eps-8 CRE_12296 CRE_12296 CRE_12297 CRE_12297 CRE_12298 CRE_12298 CRE_05339 CRE_05339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRE_05338SH3 domain-containing protein. (308 aa)
Cre-eps-8CRE-EPS-8 protein. (733 aa)
CRE_12296SAM_3 domain-containing protein. (250 aa)
CRE_12297SAM_3 domain-containing protein. (195 aa)
CRE_12298SAM_3 domain-containing protein. (130 aa)
CRE_05339SAM_3 domain-containing protein. (250 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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