14 items (Caenorhabditis remanei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cre-csn-1	CRE-CSN-1 protein. (347 aa)
	CRE_25761	PCI domain-containing protein. (372 aa)
	Cre-rpn-7	CRE-RPN-7 protein. (409 aa)
	CRE_12205	PCI domain-containing protein. (472 aa)
	Cre-rpn-5	CRE-RPN-5 protein. (507 aa)
	Cre-egl-45	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (748 aa)
	Cre-rpn-3	CRE-RPN-3 protein. (506 aa)
	Cre-rpn-6	CRE-RPN-6 protein. (420 aa)
	Cre-cif-1	COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...] (390 aa)
	Cre-rpn-9	CRE-RPN-9 protein. (390 aa)
	Cre-eif-3.E	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (432 aa)
	Cre-csn-2	CRE-CSN-2 protein. (496 aa)
	Cre-eif-3.C	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (897 aa)
	CRE_13819	PCI domain-containing protein. (310 aa)

Your Current Organism:

Caenorhabditis remanei

NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRE_12205	CRE_25761	E3N091	E3N5P8	PCI domain-containing protein.	PCI domain-containing protein.	0.986
CRE_12205	Cre-cif-1	E3N091	E3M642	PCI domain-containing protein.	COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...]	0.531
CRE_12205	Cre-csn-2	E3N091	E3LY16	PCI domain-containing protein.	CRE-CSN-2 protein.	0.595
CRE_12205	Cre-rpn-3	E3N091	E3MI14	PCI domain-containing protein.	CRE-RPN-3 protein.	0.994
CRE_12205	Cre-rpn-5	E3N091	E3MXE6	PCI domain-containing protein.	CRE-RPN-5 protein.	0.994
CRE_12205	Cre-rpn-6	E3N091	E3MCI4	PCI domain-containing protein.	CRE-RPN-6 protein.	0.925
CRE_12205	Cre-rpn-7	E3N091	E3N5P5	PCI domain-containing protein.	CRE-RPN-7 protein.	0.986
CRE_12205	Cre-rpn-9	E3N091	E3LFC8	PCI domain-containing protein.	CRE-RPN-9 protein.	0.996
CRE_13819	Cre-cif-1	E3NQC2	E3M642	PCI domain-containing protein.	COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...]	0.553
CRE_13819	Cre-csn-2	E3NQC2	E3LY16	PCI domain-containing protein.	CRE-CSN-2 protein.	0.995
CRE_13819	Cre-rpn-9	E3NQC2	E3LFC8	PCI domain-containing protein.	CRE-RPN-9 protein.	0.478
CRE_25761	CRE_12205	E3N5P8	E3N091	PCI domain-containing protein.	PCI domain-containing protein.	0.986
CRE_25761	Cre-eif-3.E	E3N5P8	E3LVW3	PCI domain-containing protein.	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.467
CRE_25761	Cre-rpn-3	E3N5P8	E3MI14	PCI domain-containing protein.	CRE-RPN-3 protein.	0.999
CRE_25761	Cre-rpn-5	E3N5P8	E3MXE6	PCI domain-containing protein.	CRE-RPN-5 protein.	0.998
CRE_25761	Cre-rpn-6	E3N5P8	E3MCI4	PCI domain-containing protein.	CRE-RPN-6 protein.	0.989
CRE_25761	Cre-rpn-9	E3N5P8	E3LFC8	PCI domain-containing protein.	CRE-RPN-9 protein.	0.999
Cre-cif-1	CRE_12205	E3M642	E3N091	COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...]	PCI domain-containing protein.	0.531
Cre-cif-1	CRE_13819	E3M642	E3NQC2	COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...]	PCI domain-containing protein.	0.553
Cre-cif-1	Cre-csn-1	E3M642	E3NT33	COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...]	CRE-CSN-1 protein.	0.553