STRINGSTRING
CRE_06167 CRE_06167 fog-3 fog-3 CRE_21112 CRE_21112 CRE_11658 CRE_11658 CRE_17800 CRE_17800 CRE_19638 CRE_19638 CRE_13239 CRE_13239 CRE_30341 CRE_30341 CRE_31643 CRE_31643 CRE_13223 CRE_13223 CRE_24342 CRE_24342 CRE_17765 CRE_17765 CRE_15143 CRE_15143 CRE_26901 CRE_26901 CRE_03570 CRE_03570 CRE_30321 CRE_30321 CRE_19589 CRE_19589 CRE_15198 CRE_15198 CRE_17741 CRE_17741 CRE_29267 CRE_29267 CRE_29266 CRE_29266 CRE_29265 CRE_29265 CRE_02717 CRE_02717 CRE_01426 CRE_01426 CRE_07075 CRE_07075 Cre-dis-3 Cre-dis-3 CRE_00832 CRE_00832 Cre-lsm-1 Cre-lsm-1 CRE_01808 CRE_01808 Cre-dph-2 Cre-dph-2 Cre-crn-5 Cre-crn-5 Cre-crn-3 Cre-crn-3 Cre-patr-1 Cre-patr-1 CRE_01855 CRE_01855 Cre-cct-2 Cre-cct-2 Cre-enol-1 Cre-enol-1 Cre-cct-4 Cre-cct-4 Cre-cct-1 Cre-cct-1 Cre-lsm-5 Cre-lsm-5 Cre-hsp-6 Cre-hsp-6 Cre-cct-7 Cre-cct-7 Cre-ppfr-2 Cre-ppfr-2 CRE_28606 CRE_28606 CRE_28052 CRE_28052 CRE_28513 CRE_28513 CRE_27458 CRE_27458 CRE_27210 CRE_27210 Cre-gut-2 Cre-gut-2 Cre-lsm-4 Cre-lsm-4 CRE_26500 CRE_26500 Cre-exos-8 Cre-exos-8 Cre-xrn-2 Cre-xrn-2 PAN3 PAN3 Cre-exos-9 Cre-exos-9 Cre-dph-1 Cre-dph-1 Cre-gld-4 Cre-gld-4 Cre-exos-3 Cre-exos-3 Cre-pab-1 Cre-pab-1 CRE_29855 CRE_29855 CRE_02934 CRE_02934 CRE_03630 CRE_03630 Cre-lsm-6 Cre-lsm-6 CRE_03921 CRE_03921 CRE_03786 CRE_03786 CRE_04843 CRE_04843 Cre-exos-1 Cre-exos-1 CRE_04692 CRE_04692 Cre-cct-6 Cre-cct-6 CRE_04763 CRE_04763 CRE_06713 CRE_06713 CRE_06714 CRE_06714 CRE_06628 CRE_06628 CRE_06650 CRE_06650 CRE_06400 CRE_06400 CRE_06401 CRE_06401 CRE_07530 CRE_07530 CRE_08144 CRE_08144 CRE_08157 CRE_08157 CRE_08009 CRE_08009 CRE_08037 CRE_08037 Cre-ntl-4 Cre-ntl-4 CRE_10856 CRE_10856 CRE_11086 CRE_11086 Cre-dcap-2 Cre-dcap-2 Cre-lsm-3 Cre-lsm-3 Cre-tin-9.2 Cre-tin-9.2 Cre-pnc-1 Cre-pnc-1 Cre-lsm-7 Cre-lsm-7 CRE_12774 CRE_12774 Cre-pxd-1 Cre-pxd-1 CRE_13992 CRE_13992 CRE_14504 CRE_14504 CRE_20183 CRE_20183 CRE_20280 CRE_20280 Cre-let-711 Cre-let-711 CRE_20295 CRE_20295 Cre-cct-5 Cre-cct-5 Cre-tag-153 Cre-tag-153 CRE_17933 CRE_17933 CRE_22479 CRE_22479 Cre-pab-2 Cre-pab-2 Cre-pqn-39 Cre-pqn-39 Cre-exos-7 Cre-exos-7 CRE_21264 CRE_21264 CRE_20737 CRE_20737 Cre-cyn-5 Cre-cyn-5 CRE_24475 CRE_24475 Cre-ntl-2 Cre-ntl-2 Cre-ccf-1 Cre-ccf-1 Cre-ntl-3 Cre-ntl-3 CRE_09582 CRE_09582 Cre-exos-4.2 Cre-exos-4.2 Cre-cyn-6 Cre-cyn-6 CRE_25738 CRE_25738 CRE_29868 CRE_29868 Cre-xrn-1 Cre-xrn-1 CRE_04933 CRE_04933 Cre-hsp-60 Cre-hsp-60 CRE_07603 CRE_07603 CRE_13511 CRE_13511 CRE_14120 CRE_14120 Cre-exos-2 Cre-exos-2 Cre-lsm-8 Cre-lsm-8 CRE_16179 CRE_16179 CRE_15513 CRE_15513 Cre-ccr-4 Cre-ccr-4 CRE_18010 CRE_18010 Cre-rig-1 Cre-rig-1 Cre-cgh-1 Cre-cgh-1 CRE_31358 CRE_31358 CRE_31359 CRE_31359 CRE_06839 CRE_06839 Cre-cct-3 Cre-cct-3 Cre-ndx-1 Cre-ndx-1 CRE_14861 CRE_14861 CRE_19883 CRE_19883 CRE_24676 CRE_24676 CRE_23033 CRE_23033 CRE_29150 CRE_29150 Cre-toc-1 Cre-toc-1 Cre-dcs-1 Cre-dcs-1 CRE_13706 CRE_13706 CRE_17531 CRE_17531 CRE_27842 CRE_27842 CRE_12309 CRE_12309 Cre-dcap-1 Cre-dcap-1 CRE_13733 CRE_13733 CRE_24812 CRE_24812 CRE_25905 CRE_25905 CRE_02677 CRE_02677
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRE_06167Isochorismatase domain-containing protein. (316 aa)
fog-3CRE-FOG-3 protein. (264 aa)
CRE_21112Uncharacterized protein. (211 aa)
CRE_11658Uncharacterized protein; Belongs to the DEAD box helicase family. (526 aa)
CRE_17800Na_H_antiporter domain-containing protein. (301 aa)
CRE_19638Uncharacterized protein. (315 aa)
CRE_13239Uncharacterized protein. (73 aa)
CRE_30341Uncharacterized protein. (947 aa)
CRE_31643Uncharacterized protein. (274 aa)
CRE_13223PMC2NT domain-containing protein. (138 aa)
CRE_24342DSHCT domain-containing protein. (251 aa)
CRE_17765Isochorismatase domain-containing protein. (276 aa)
CRE_15143ANK_REP_REGION domain-containing protein. (775 aa)
CRE_26901Uncharacterized protein; Belongs to the heat shock protein 70 family. (610 aa)
CRE_03570Uncharacterized protein. (895 aa)
CRE_30321Uncharacterized protein. (588 aa)
CRE_19589ANK_REP_REGION domain-containing protein. (1817 aa)
CRE_15198Uncharacterized protein. (1138 aa)
CRE_17741Uncharacterized protein. (358 aa)
CRE_29267Uncharacterized protein. (234 aa)
CRE_29266Uncharacterized protein. (209 aa)
CRE_29265Uncharacterized protein. (201 aa)
CRE_02717Uncharacterized protein. (273 aa)
CRE_01426Uncharacterized protein. (435 aa)
CRE_07075Uncharacterized protein. (655 aa)
Cre-dis-3CRE-DIS-3 protein. (799 aa)
CRE_00832Uncharacterized protein. (642 aa)
Cre-lsm-1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (125 aa)
CRE_018082-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. (217 aa)
Cre-dph-22-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. (168 aa)
Cre-crn-5CRE-CRN-5 protein. (214 aa)
Cre-crn-3CRE-CRN-3 protein. (488 aa)
Cre-patr-1CRE-PATR-1 protein. (823 aa)
CRE_01855Uncharacterized protein. (73 aa)
Cre-cct-2CRE-CCT-2 protein. (529 aa)
Cre-enol-1CRE-ENOL-1 protein. (466 aa)
Cre-cct-4T-complex protein 1 subunit delta. (542 aa)
Cre-cct-1CRE-CCT-1 protein. (550 aa)
Cre-lsm-5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
Cre-hsp-6CRE-HSP-6 protein; Belongs to the heat shock protein 70 family. (657 aa)
Cre-cct-7T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (535 aa)
Cre-ppfr-2CRE-PPFR-2 protein. (414 aa)
CRE_28606Glutaredoxin domain-containing protein. (223 aa)
CRE_28052FHA domain-containing protein. (859 aa)
CRE_28513WD_REPEATS_REGION domain-containing protein. (437 aa)
CRE_27458Uncharacterized protein. (565 aa)
CRE_27210Uncharacterized protein. (1120 aa)
Cre-gut-2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
Cre-lsm-4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
CRE_26500Uncharacterized protein. (296 aa)
Cre-exos-8CRE-EXOS-8 protein. (277 aa)
Cre-xrn-25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. (988 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (642 aa)
Cre-exos-9CRE-EXOS-9 protein. (432 aa)
Cre-dph-12-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. (405 aa)
Cre-gld-4CRE-GLD-4 protein. (907 aa)
Cre-exos-3CRE-EXOS-3 protein. (271 aa)
Cre-pab-1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (695 aa)
CRE_29855Uncharacterized protein. (669 aa)
CRE_02934CCHC-type domain-containing protein. (601 aa)
CRE_03630Uncharacterized protein. (739 aa)
Cre-lsm-6CRE-LSM-6 protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (77 aa)
CRE_03921Uncharacterized protein. (325 aa)
CRE_03786Uncharacterized protein. (1462 aa)
CRE_04843Endo/exonuclease/phosphatase domain-containing protein. (626 aa)
Cre-exos-1CRE-EXOS-1 protein. (213 aa)
CRE_04692Uncharacterized protein. (1713 aa)
Cre-cct-6CRE-CCT-6 protein. (539 aa)
CRE_04763DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (871 aa)
CRE_06713Uncharacterized protein. (158 aa)
CRE_06714Uncharacterized protein. (245 aa)
CRE_06628CCHC-type domain-containing protein. (1203 aa)
CRE_06650Uncharacterized protein. (188 aa)
CRE_06400Uncharacterized protein. (72 aa)
CRE_06401Uncharacterized protein. (112 aa)
CRE_07530ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (832 aa)
CRE_08144YL1_C domain-containing protein. (368 aa)
CRE_08157Peptidase C39 domain-containing protein. (234 aa)
CRE_08009Uncharacterized protein. (661 aa)
CRE_08037Uncharacterized protein. (661 aa)
Cre-ntl-4CRE-NTL-4 protein. (832 aa)
CRE_10856Uncharacterized protein. (1494 aa)
CRE_11086Uncharacterized protein. (2702 aa)
Cre-dcap-2CRE-DCAP-2 protein. (771 aa)
Cre-lsm-3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
Cre-tin-9.2CRE-TIN-9.2 protein. (372 aa)
Cre-pnc-1CRE-PNC-1 protein. (353 aa)
Cre-lsm-7CRE-LSM-7 protein. (103 aa)
CRE_12774Uncharacterized protein. (1297 aa)
Cre-pxd-1CRE-PXD-1 protein. (499 aa)
CRE_13992NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (235 aa)
CRE_14504Uncharacterized protein. (632 aa)
CRE_20183USP domain-containing protein. (1130 aa)
CRE_20280Uncharacterized protein. (972 aa)
Cre-let-711CRE-LET-711 protein. (1664 aa)
CRE_20295Uncharacterized protein. (329 aa)
Cre-cct-5CRE-CCT-5 protein. (567 aa)
Cre-tag-153CRE-TAG-153 protein. (765 aa)
CRE_17933Uncharacterized protein. (138 aa)
CRE_22479Uncharacterized protein. (83 aa)
Cre-pab-2Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (730 aa)
Cre-pqn-39CRE-PQN-39 protein. (771 aa)
Cre-exos-7CRE-EXOS-7 protein. (314 aa)
CRE_21264Uncharacterized protein. (778 aa)
CRE_20737Uncharacterized protein. (770 aa)
Cre-cyn-5Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (203 aa)
CRE_24475Uncharacterized protein. (97 aa)
Cre-ntl-2CRE-NTL-2 protein. (374 aa)
Cre-ccf-1CRE-CCF-1 protein. (328 aa)
Cre-ntl-3CRE-NTL-3 protein. (669 aa)
CRE_09582CCHC-type domain-containing protein. (300 aa)
Cre-exos-4.2CRE-EXOS-4.2 protein. (273 aa)
Cre-cyn-6Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (202 aa)
CRE_25738RNase_PH domain-containing protein. (256 aa)
CRE_29868Uncharacterized protein. (1039 aa)
Cre-xrn-15'-3' exoribonuclease 1. (1668 aa)
CRE_04933Uncharacterized protein. (87 aa)
Cre-hsp-60CRE-HSP-60 protein; Belongs to the chaperonin (HSP60) family. (574 aa)
CRE_07603Uncharacterized protein. (362 aa)
CRE_13511RRM domain-containing protein. (201 aa)
CRE_14120Uncharacterized protein. (239 aa)
Cre-exos-2CRE-EXOS-2 protein. (303 aa)
Cre-lsm-8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
CRE_16179RNase_PH domain-containing protein. (185 aa)
CRE_15513Uncharacterized protein. (234 aa)
Cre-ccr-4CRE-CCR-4 protein. (672 aa)
CRE_18010Uncharacterized protein. (105 aa)
Cre-rig-1CRE-RIG-1 protein. (1080 aa)
Cre-cgh-1CRE-CGH-1 protein; Belongs to the DEAD box helicase family. (429 aa)
CRE_31358RNase_PH domain-containing protein. (214 aa)
CRE_31359HRDC domain-containing protein. (860 aa)
CRE_06839Uncharacterized protein. (386 aa)
Cre-cct-3T-complex protein 1 subunit gamma. (544 aa)
Cre-ndx-1CRE-NDX-1 protein. (365 aa)
CRE_14861Uncharacterized protein. (751 aa)
CRE_19883Uncharacterized protein. (661 aa)
CRE_24676Uncharacterized protein. (621 aa)
CRE_23033Uncharacterized protein. (216 aa)
CRE_29150CCHC-type domain-containing protein. (1044 aa)
Cre-toc-1CRE-TOC-1 protein. (420 aa)
Cre-dcs-1CRE-DCS-1 protein. (311 aa)
CRE_13706Uncharacterized protein. (158 aa)
CRE_17531Uncharacterized protein. (225 aa)
CRE_27842NOT2_3_5 domain-containing protein. (132 aa)
CRE_12309Isochorismatase domain-containing protein. (100 aa)
Cre-dcap-1CRE-DCAP-1 protein. (335 aa)
CRE_13733S1 motif domain-containing protein. (712 aa)
CRE_24812Uncharacterized protein. (1131 aa)
CRE_25905Uncharacterized protein. (359 aa)
CRE_02677Uncharacterized protein. (631 aa)
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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