5 items (Nodularia spumigena) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NSP_25640	tRNA pseudouridine synthase A; Nsp25640; ORF_ID:nsp25640; Belongs to the pseudouridine synthase RsuA family. (208 aa)
	NSP_31390	GTP-binding protein TypA/BipA; Nsp31390; ORF_ID:nsp31390. (596 aa)
	der	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (454 aa)
	NSP_34420	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420. (486 aa)
	NSP_9740	Ribosomal small subunit pseudouridine synthase A; Nsp9740; ORF_ID:nsp9740; Belongs to the pseudouridine synthase RsuA family. (264 aa)

Your Current Organism:

Nodularia spumigena

NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NSP_25640	NSP_34420	NSP_25640	NSP_34420	tRNA pseudouridine synthase A; Nsp25640; ORF_ID:nsp25640; Belongs to the pseudouridine synthase RsuA family.	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420.	0.533
NSP_25640	der	NSP_25640	NSP_34310	tRNA pseudouridine synthase A; Nsp25640; ORF_ID:nsp25640; Belongs to the pseudouridine synthase RsuA family.	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.759
NSP_31390	NSP_34420	NSP_31390	NSP_34420	GTP-binding protein TypA/BipA; Nsp31390; ORF_ID:nsp31390.	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420.	0.758
NSP_31390	der	NSP_31390	NSP_34310	GTP-binding protein TypA/BipA; Nsp31390; ORF_ID:nsp31390.	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.763
NSP_34420	NSP_25640	NSP_34420	NSP_25640	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420.	tRNA pseudouridine synthase A; Nsp25640; ORF_ID:nsp25640; Belongs to the pseudouridine synthase RsuA family.	0.533
NSP_34420	NSP_31390	NSP_34420	NSP_31390	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420.	GTP-binding protein TypA/BipA; Nsp31390; ORF_ID:nsp31390.	0.758
NSP_34420	NSP_9740	NSP_34420	NSP_9740	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420.	Ribosomal small subunit pseudouridine synthase A; Nsp9740; ORF_ID:nsp9740; Belongs to the pseudouridine synthase RsuA family.	0.533
NSP_9740	NSP_34420	NSP_9740	NSP_34420	Ribosomal small subunit pseudouridine synthase A; Nsp9740; ORF_ID:nsp9740; Belongs to the pseudouridine synthase RsuA family.	GTPase SAR1 and small G-like proteins; Nsp34420; ORF_ID:nsp34420.	0.533
NSP_9740	der	NSP_9740	NSP_34310	Ribosomal small subunit pseudouridine synthase A; Nsp9740; ORF_ID:nsp9740; Belongs to the pseudouridine synthase RsuA family.	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.862
der	NSP_25640	NSP_34310	NSP_25640	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	tRNA pseudouridine synthase A; Nsp25640; ORF_ID:nsp25640; Belongs to the pseudouridine synthase RsuA family.	0.759
der	NSP_31390	NSP_34310	NSP_31390	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	GTP-binding protein TypA/BipA; Nsp31390; ORF_ID:nsp31390.	0.763
der	NSP_9740	NSP_34310	NSP_9740	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal small subunit pseudouridine synthase A; Nsp9740; ORF_ID:nsp9740; Belongs to the pseudouridine synthase RsuA family.	0.862