STRINGSTRING
NSP_9670 NSP_9670 NSP_11560 NSP_11560 mraY mraY NSP_23020 NSP_23020 NSP_23960 NSP_23960 NSP_32020 NSP_32020 ddl ddl NSP_38640 NSP_38640 murG murG NSP_39600 NSP_39600 NSP_42430 NSP_42430 NSP_45890 NSP_45890 NSP_49320 NSP_49320 murF murF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NSP_9670Cyanophycin synthase; Nsp9670; ORF_ID:nsp9670. (824 aa)
NSP_11560D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (236 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (370 aa)
NSP_23020D-alanine--D-alanine ligase; Nsp23020; ORF_ID:nsp23020. (350 aa)
NSP_23960Hypothetical protein; Nsp23960; ORF_ID:nsp23960. (331 aa)
NSP_32020D-alanyl-D-alanine carboxypeptidase; Nsp32020; ORF_ID:nsp32020. (271 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (355 aa)
NSP_38640Cyanophycin synthase; Nsp38640; ORF_ID:nsp38640. (636 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (359 aa)
NSP_39600Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (395 aa)
NSP_42430Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein; Nsp42430; ORF_ID:nsp42430. (385 aa)
NSP_45890Putative arabinose kinase; Nsp45890; ORF_ID:nsp45890. (359 aa)
NSP_49320Hypothetical protein; Nsp49320; ORF_ID:nsp49320. (136 aa)
murFUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (450 aa)
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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