STRINGSTRING
EDM27073.1 EDM27073.1 EDM26428.1 EDM26428.1 EDM26805.1 EDM26805.1 EDM28625.1 EDM28625.1 EDM28063.1 EDM28063.1 EDM27137.1 EDM27137.1 EDM29459.1 EDM29459.1 EDM29559.1 EDM29559.1 EDM29603.1 EDM29603.1 EDM29724.1 EDM29724.1 EDM27259.1 EDM27259.1 EDM27273.1 EDM27273.1 EDM29175.1 EDM29175.1 EDM29181.1 EDM29181.1 EDM29351.1 EDM29351.1 EDM29404.1 EDM29404.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDM27073.1Hypothetical protein; COG0752 Glycyl-tRNA synthetase, alpha subunit. (702 aa)
EDM26428.1Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase. (370 aa)
EDM26805.1Hypothetical protein. (718 aa)
EDM28625.1Hypothetical protein. (758 aa)
EDM28063.1Putative secreted protein; COG0376 Catalase (peroxidase I). (684 aa)
EDM27137.1Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. (489 aa)
EDM29459.1Hypothetical protein; COG0523 Putative GTPases (G3E family). (785 aa)
EDM29559.1Hypothetical protein. (886 aa)
EDM29603.1Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase. (155 aa)
EDM29724.1Iduronate-2-sulfatase; COG3119 Arylsulfatase A and related enzymes. (519 aa)
EDM27259.1Hypothetical protein. (524 aa)
EDM27273.1Hypothetical protein. (524 aa)
EDM29175.1COG3661 Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (703 aa)
EDM29181.1COG3661 Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (1607 aa)
EDM29351.1Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (592 aa)
EDM29404.1Sulfatase family protein; COG3119 Arylsulfatase A and related enzymes. (504 aa)
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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